Application of molecular dynamics simulation in self-assembled cancer nanomedicine.

IF 11.3 1区 医学 Q1 Medicine Biomaterials Research Pub Date : 2023-05-04 DOI:10.1186/s40824-023-00386-7
Xueli Xu, Ao Liu, Shuangqing Liu, Yanling Ma, Xinyu Zhang, Meng Zhang, Jinhua Zhao, Shuo Sun, Xiao Sun
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引用次数: 6

Abstract

Self-assembled nanomedicine holds great potential in cancer theragnostic. The structures and dynamics of nanomedicine can be affected by a variety of non-covalent interactions, so it is essential to ensure the self-assembly process at atomic level. Molecular dynamics (MD) simulation is a key technology to link microcosm and macroscale. Along with the rapid development of computational power and simulation methods, scientists could simulate the specific process of intermolecular interactions. Thus, some experimental observations could be explained at microscopic level and the nanomedicine synthesis process would have traces to follow. This review not only outlines the concept, basic principle, and the parameter setting of MD simulation, but also highlights the recent progress in MD simulation for self-assembled cancer nanomedicine. In addition, the physicochemical parameters of self-assembly structure and interaction between various assembled molecules under MD simulation are also discussed. Therefore, this review will help advanced and novice researchers to quickly zoom in on fundamental information and gather some thought-provoking ideas to advance this subfield of self-assembled cancer nanomedicine.

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分子动力学模拟在自组装肿瘤纳米药物中的应用。
自组装纳米药物在癌症诊断中具有巨大的潜力。纳米药物的结构和动力学会受到多种非共价相互作用的影响,因此确保原子水平上的自组装过程至关重要。分子动力学模拟是连接微观世界和宏观世界的关键技术。随着计算能力和模拟方法的快速发展,科学家可以模拟分子间相互作用的具体过程。因此,一些实验观察可以在微观水平上解释,纳米药物合成过程将有迹可循。本文综述了自组装肿瘤纳米药物的分子动力学模拟的概念、基本原理和参数设置,重点介绍了分子动力学模拟的最新进展。此外,还讨论了自组装结构的物理化学参数以及各种组装分子在MD模拟下的相互作用。因此,本综述将有助于高级和新手研究人员快速放大基本信息,并收集一些发人深省的想法,以推进自组装癌症纳米医学的这一分支领域。
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来源期刊
Biomaterials Research
Biomaterials Research Medicine-Medicine (miscellaneous)
CiteScore
10.20
自引率
3.50%
发文量
63
审稿时长
30 days
期刊介绍: Biomaterials Research, the official journal of the Korean Society for Biomaterials, is an open-access interdisciplinary publication that focuses on all aspects of biomaterials research. The journal covers a wide range of topics including novel biomaterials, advanced techniques for biomaterial synthesis and fabrication, and their application in biomedical fields. Specific areas of interest include functional biomaterials, drug and gene delivery systems, tissue engineering, nanomedicine, nano/micro-biotechnology, bio-imaging, regenerative medicine, medical devices, 3D printing, and stem cell research. By exploring these research areas, Biomaterials Research aims to provide valuable insights and promote advancements in the biomaterials field.
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