An insight into the mechanisms of action of selected bioactive compounds against epigenetic targets of prostate cancer: implications on histones modifications.

In Silico Pharmacology Pub Date : 2023-04-15 eCollection Date: 2023-01-01 DOI:10.1007/s40203-023-00148-2
Babangida Sanusi Katsayal, Gilead Ebiegberi Forcados, Abdurrahman Pharmacy Yusuf, Yunus Aisha Lawal, Shehu Aisha Jibril, Hussaini Nuraddeen, Musa Mubarak Ibrahim, Idris Zubairu Sadiq, Murtala Bello Abubakar, Ibrahim Malami, Ibrahim Babangida Abubakar, Aliyu Muhammad
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Abstract

Prostate cancer is a leading cause of morbidity and mortality among men globally. In this study, we employed an in silico approach to predict the possible mechanisms of action of selected novel compounds reported against prostate cancer epigenetic targets and their derivatives, exhausting through ADMET profiling, drug-likeness, and molecular docking analyses. The selected compounds: sulforaphane, silibinin, 3, 3'-diindolylmethane (DIM), and genistein largely conformed to ADMET and drug-likeness rules including Lipinski's. Docking studies revealed strong binding energy of sulforaphane with HDAC6 (- 4.2 kcal/ mol), DIM versus HDAC2 (- 5.2 kcal/mol), genistein versus HDAC6 (- 4.1 kcal/mol), and silibinin against HDAC1 (- 7.0 kcal/mol) coupled with improved binding affinities and biochemical stabilities after derivatization. Findings from this study may provide insight into the potential epigenetic reprogramming mechanisms of these compounds against prostate cancer and could pave the way toward more success in prostate cancer phytotherapy.

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洞察特定生物活性化合物对前列腺癌表观遗传靶点的作用机制:对组蛋白修饰的影响。
前列腺癌是全球男性发病和死亡的主要原因。在这项研究中,我们采用了硅学方法,通过ADMET分析、药物相似性分析和分子对接分析,预测了已报道的针对前列腺癌表观遗传靶点的某些新型化合物及其衍生物的可能作用机制。所选化合物:莱菔硫烷、丝利比宁、3, 3'-diindolylmethane (DIM) 和染料木素在很大程度上符合 ADMET 和药物相似性规则,包括利宾斯基规则。Docking 研究显示,苏拉叶素与 HDAC6(- 4.2 kcal/ mol)、DIM 与 HDAC2(- 5.2 kcal/mol)、染料木素与 HDAC6(- 4.1 kcal/mol)、丝利比宁与 HDAC1(- 7.0 kcal/mol)的结合能很强,而且衍生化后的结合亲和力和生化稳定性也有所提高。这项研究的结果可以让人们深入了解这些化合物对前列腺癌的潜在表观遗传重编程机制,并为前列腺癌植物疗法取得更大成功铺平道路。
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