The Comprehensive Analysis Illustrates the Role of CDCA5 in Breast Cancer: An Effective Diagnosis and Prognosis Biomarker.

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY International Journal of Genomics Pub Date : 2023-01-01 DOI:10.1155/2023/7150141
Yang Gao, Shuting Liu, Junyuan Yang, Min Su, Jingjing Xu, Hua Wang, Jingwei Zhang
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Abstract

Background: Several studies have been conducted to investigate the role of cell division cycle-associated 5 (CDCA5) in cancer. Its role in breast cancer, however, remains unknown.

Methods: The Gene Expression Omnibus and Cancer Genome Atlas Program databases provided the open-access information needed for the research. The CCK8 and colony formation assays were used to measure cell proliferation. The capacity of breast cancer cells to invade and migrate was assessed using the transwell assay.

Results: In our study, CDCA5 was identified as the interested gene through a series of bioinformatics analysis. We found a higher CDCA5 expression level in tissue and cells of breast cancer. Meanwhile, CDCA5 has been linked to increased proliferation, invasion, and migration of breast cancer cells, which was also associated with worse clinical features. The biochemical pathways, in which CDCA5 was engaged, were identified using biological enrichment analysis. Immune infiltration research revealed that CDCA5 was linked to enhanced activity of several immune function terms. Meanwhile, DNA methylation might be responsible for the aberrant level of CDCA5 in tumor tissue. In addition, CDCA5 could significantly increase the paclitaxel and docetaxel sensitivity, indicating that it has the potential for clinical application. Also, we found that CDCA5 is mainly localized in cell nucleoplasm. Moreover, in the breast cancer microenvironment, we found that CDCA5 is mainly expressed in malignant cells, proliferation T cells, and neutrophils.

Conclusion: Overall, our findings suggest that CDCA5 is a potential prognostic indicator and target for breast cancer, which can indicate the direction of the relevant research.

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综合分析表明CDCA5在乳腺癌中的作用:一种有效的诊断和预后生物标志物。
背景:研究细胞分裂周期相关5 (CDCA5)在癌症中的作用。然而,它在乳腺癌中的作用尚不清楚。方法:基因表达综合数据库和癌症基因组图谱计划数据库为研究提供了开放获取的信息。CCK8和集落形成法检测细胞增殖。使用transwell实验评估乳腺癌细胞的侵袭和迁移能力。结果:本研究通过一系列生物信息学分析,确定了CDCA5为感兴趣的基因。我们发现CDCA5在乳腺癌组织和细胞中表达水平较高。同时,CDCA5与乳腺癌细胞的增殖、侵袭和迁移增加有关,这也与更差的临床特征有关。利用生物富集分析确定了CDCA5参与的生化途径。免疫浸润研究表明,CDCA5与几种免疫功能项的活性增强有关。同时,DNA甲基化可能是导致肿瘤组织中CDCA5水平异常的原因。此外,CDCA5可显著提高紫杉醇和多西紫杉醇的敏感性,具有临床应用潜力。此外,我们发现CDCA5主要定位于细胞核质中。此外,在乳腺癌微环境中,我们发现CDCA5主要在恶性细胞、增殖T细胞和中性粒细胞中表达。结论:综上所述,我们的研究结果提示CDCA5是乳腺癌潜在的预后指标和靶点,可以为相关研究指明方向。
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来源期刊
International Journal of Genomics
International Journal of Genomics BIOCHEMISTRY & MOLECULAR BIOLOGY-BIOTECHNOLOGY & APPLIED MICROBIOLOGY
CiteScore
5.40
自引率
0.00%
发文量
33
审稿时长
17 weeks
期刊介绍: International Journal of Genomics is a peer-reviewed, Open Access journal that publishes research articles as well as review articles in all areas of genome-scale analysis. Topics covered by the journal include, but are not limited to: bioinformatics, clinical genomics, disease genomics, epigenomics, evolutionary genomics, functional genomics, genome engineering, and synthetic genomics.
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