Yeast biopanning against site-specific phosphorylations in tau.

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Protein Engineering Design & Selection Pub Date : 2023-01-21 DOI:10.1093/protein/gzad005
Monika Arbaciauskaite, Azady Pirhanov, Erik Ammermann, Yu Lei, Yong Ku Cho
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Abstract

The detection of site-specific phosphorylation in the microtubule-associated protein tau is emerging as a means to diagnose and monitor the progression of Alzheimer's Disease and other neurodegenerative diseases. However, there is a lack of phospho-specific monoclonal antibodies and limited validation of their binding specificity. Here, we report a novel approach using yeast biopanning against synthetic peptides containing site-specific phosphorylations. Using yeast cells displaying a previously validated phospho-tau (p-tau) single-chain variable region fragment (scFv), we show selective yeast cell binding based on single amino acid phosphorylation on the antigen. We identify conditions that allow phospho-specific biopanning using scFvs with a wide range of affinities (KD = 0.2 to 60 nM). Finally, we demonstrate the capability of screening large libraries by performing biopanning in 6-well plates. These results show that biopanning can effectively select yeast cells based on phospho-site specific antibody binding, opening doors for the facile identification of high-quality monoclonal antibodies.

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针对 tau 中特异位点磷酸化的酵母生物扫描。
检测微管相关蛋白 tau 的特异位点磷酸化正在成为诊断和监测阿尔茨海默病和其他神经退行性疾病进展的一种手段。然而,目前缺乏磷酸化特异性单克隆抗体,对其结合特异性的验证也很有限。在这里,我们报告了一种利用酵母生物平移来检测含有特异性磷酸化位点的合成肽的新方法。利用酵母细胞显示先前验证过的磷酸化头(p-tau)单链可变区片段(scFv),我们展示了基于抗原上单个氨基酸磷酸化的酵母细胞选择性结合。我们确定了使用具有广泛亲和力(KD = 0.2 至 60 nM)的 scFv 进行磷酸化特异性生物扫描的条件。最后,我们展示了在 6 孔板中进行生物扫描筛选大型文库的能力。这些结果表明,生物扫描能根据磷酸化位点特异性抗体结合情况有效筛选酵母细胞,为快速鉴定高质量单克隆抗体打开了大门。
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来源期刊
Protein Engineering Design & Selection
Protein Engineering Design & Selection 生物-生化与分子生物学
CiteScore
3.30
自引率
4.20%
发文量
14
审稿时长
6-12 weeks
期刊介绍: Protein Engineering, Design and Selection (PEDS) publishes high-quality research papers and review articles relevant to the engineering, design and selection of proteins for use in biotechnology and therapy, and for understanding the fundamental link between protein sequence, structure, dynamics, function, and evolution.
期刊最新文献
Optimized single-cell gates for yeast display screening. TIMED-Design: flexible and accessible protein sequence design with convolutional neural networks. Correction to: De novo design of a polycarbonate hydrolase. Interactive computational and experimental approaches improve the sensitivity of periplasmic binding protein-based nicotine biosensors for measurements in biofluids. Design of functional intrinsically disordered proteins.
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