Molecular size dependence on achievable resolution from XFEL single-particle 3D reconstruction.

Pub Date : 2023-03-01 DOI:10.1063/4.0000175
Miki Nakano, Osamu Miyashita, Florence Tama
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Abstract

Single-particle analysis using x-ray free-electron lasers (XFELs) is a novel method for obtaining structural information of samples in a state close to nature. In particular, it is suitable for observing the inner structure of large biomolecules by taking advantage of the high transmittance of x-rays. However, systematic studies on the resolution achievable for large molecules are lacking. In this study, the molecular size dependence of the resolution of a three-dimensional (3D) structure resulting from XFEL single-particle reconstruction is evaluated using synthetic data. Evidently, 3D structures of larger molecules can be restored with higher detail (defined relative to the molecular sizes) than smaller ones; however, reconstruction with high absolute resolution (defined in nm-1) is challenging. Our results provide useful information for the experimental design of 3D structure reconstruction using coherent x-ray diffraction patterns of single-particles.

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分子大小依赖于可实现的分辨率从XFEL单粒子三维重建。
利用x射线自由电子激光器(XFELs)进行单粒子分析是一种获取接近自然状态下样品结构信息的新方法。尤其适合利用x射线的高透射率来观察大分子的内部结构。然而,对于大分子的分辨率还缺乏系统的研究。在这项研究中,利用合成数据评估了由XFEL单粒子重建产生的三维(3D)结构分辨率的分子大小依赖性。显然,与小分子相比,大分子的三维结构可以以更高的细节(相对于分子大小的定义)得到恢复;然而,具有高绝对分辨率(以nm-1定义)的重建是具有挑战性的。我们的结果为单粒子相干x射线衍射图重建三维结构的实验设计提供了有用的信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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