Functional Synthetic Biology.

IF 2.6 Q2 BIOCHEMICAL RESEARCH METHODS Synthetic biology (Oxford, England) Pub Date : 2023-04-08 eCollection Date: 2023-01-01 DOI:10.1093/synbio/ysad006
Ibrahim Aldulijan, Jacob Beal, Sonja Billerbeck, Jeff Bouffard, Gaël Chambonnier, Nikolaos Ntelkis, Isaac Guerreiro, Martin Holub, Paul Ross, Vinoo Selvarajah, Noah Sprent, Gonzalo Vidal, Alejandro Vignoni
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Abstract

Synthetic biologists have made great progress over the past decade in developing methods for modular assembly of genetic sequences and in engineering biological systems with a wide variety of functions in various contexts and organisms. However, current paradigms in the field entangle sequence and functionality in a manner that makes abstraction difficult, reduces engineering flexibility and impairs predictability and design reuse. Functional Synthetic Biology aims to overcome these impediments by focusing the design of biological systems on function, rather than on sequence. This reorientation will decouple the engineering of biological devices from the specifics of how those devices are put to use, requiring both conceptual and organizational change, as well as supporting software tooling. Realizing this vision of Functional Synthetic Biology will allow more flexibility in how devices are used, more opportunity for reuse of devices and data, improvements in predictability and reductions in technical risk and cost.

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功能合成生物学。
过去十年来,合成生物学家在开发基因序列模块化组装方法以及在各种环境和生物体内设计具有多种功能的生物系统方面取得了巨大进步。然而,该领域目前的范式将序列和功能纠缠在一起,难以进行抽象,降低了工程灵活性,损害了可预测性和设计的重复使用。功能合成生物学旨在克服这些障碍,将生物系统的设计重点放在功能上,而不是序列上。这种重新定位将使生物装置的工程设计与这些装置的具体使用方法脱钩,这需要概念和组织上的变革,也需要配套的软件工具。实现功能合成生物学的这一愿景,将使设备的使用方式更加灵活,设备和数据的再利用机会增多,可预测性提高,技术风险和成本降低。
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