Complete genome sequence of functional probiotic candidate Lactobacillus amylovorus CACC736.

IF 2.7 3区 农林科学 Q1 AGRICULTURE, DAIRY & ANIMAL SCIENCE Journal of Animal Science and Technology Pub Date : 2023-03-01 DOI:10.5187/jast.2022.e85
Soyeon Park, Jung-Ae Kim, Hyun-Jun Jang, Dae-Hyuk Kim, Yangseon Kim
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Abstract

Lactobacillus amylovorus CACC736 was originated from swine feces in Korea. The complete genome sequences of the strain contained one circular chromosome (2,057,809 base pair [bp]) with 38.2% guanine-cytosine (GC) content and two circular plasmids, namely, pCACC736-1 and pCACC736-2. The predicted protein-coding genes, which are encoding the clustered regularly interspaced short palindromic repeats (CRISPR)-associated proteins, biosynthesis of bacteriocin (helveticin J), and the related proteins of the bile, acid tolerance. Notably, the genes related to vitamin B-group biosynthesis (riboflavin and cobalamin) were also found in L. amylovorus CACC736. Collectively, the complete genome sequence of the L. amylovorus CACC736 will aid in the development of functional probiotics in the animal industry.

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功能性候选益生菌淀粉样乳杆菌CACC736的全基因组序列。
淀粉样乳杆菌CACC736来源于韩国的猪粪便。该菌株全基因组序列包含一条环状染色体(2057809碱基对[bp]),鸟嘌呤-胞嘧啶(GC)含量为38.2%,两个环状质粒分别为pCACC736-1和pCACC736-2。预测的蛋白质编码基因,编码聚集规律间隔短回文重复序列(CRISPR)相关蛋白,生物合成细菌素(helveticin J),以及胆汁、酸耐受性相关蛋白。值得注意的是,在L. amylovorus CACC736中也发现了与维生素b族生物合成相关的基因(核黄素和钴胺素)。总的来说,淀粉状乳杆菌CACC736的全基因组序列将有助于动物工业中功能性益生菌的开发。
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来源期刊
Journal of Animal Science and Technology
Journal of Animal Science and Technology Agricultural and Biological Sciences-Food Science
CiteScore
4.50
自引率
8.70%
发文量
96
审稿时长
7 weeks
期刊介绍: Journal of Animal Science and Technology (J. Anim. Sci. Technol. or JAST) is a peer-reviewed, open access journal publishing original research, review articles and notes in all fields of animal science. Topics covered by the journal include: genetics and breeding, physiology, nutrition of monogastric animals, nutrition of ruminants, animal products (milk, meat, eggs and their by-products) and their processing, grasslands and roughages, livestock environment, animal biotechnology, animal behavior and welfare. Articles generally report research involving beef cattle, dairy cattle, pigs, companion animals, goats, horses, and sheep. However, studies involving other farm animals, aquatic and wildlife species, and laboratory animal species that address fundamental questions related to livestock and companion animal biology will also be considered for publication. The Journal of Animal Science and Technology (J. Anim. Technol. or JAST) has been the official journal of The Korean Society of Animal Science and Technology (KSAST) since 2000, formerly known as The Korean Journal of Animal Sciences (launched in 1956).
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