Computational evaluation of bioactive compounds in Curcuma zanthorrhiza targeting SIRT1 and NFκB.

Q3 Agricultural and Biological Sciences BioTechnologia Pub Date : 2023-01-01 DOI:10.5114/bta.2023.127206
Sasangka Prasetyawan, Anna Safitri, Mochammad Fitri Atho'illah, Sri Rahayu
{"title":"Computational evaluation of bioactive compounds in <i>Curcuma zanthorrhiza</i> targeting SIRT1 and NFκB.","authors":"Sasangka Prasetyawan,&nbsp;Anna Safitri,&nbsp;Mochammad Fitri Atho'illah,&nbsp;Sri Rahayu","doi":"10.5114/bta.2023.127206","DOIUrl":null,"url":null,"abstract":"<p><p>Type 2 diabetes mellitus (T2DM) is a metabolic disease with a high risk of complications and mortality. Novel T2DM therapeutic interventions are needed to combat this disease. This study aimed to identify pathways involved in T2DM and investigate sesquiterpenoid compounds from <i>Curcuma zanthorrhiza</i> that could act as SIRT1 activators and NFκB inhibitors. Protein-protein interaction and bioactive compound analysis were conducted using the STRING and STITCH databases, respectively. Molecular docking was used to determine the compounds' interactions with SIRT1 and NFκB, while toxicity prediction was performed using Protox II. The results showed that curcumin could act as a SIRT1 activator (4I5I, 4ZZJ, and 5BTR) and NFκB inhibitor on the p52 relB complex and p50-p65 heterodimer, while xanthorrhizol could function as an IκK inhibitor. The toxicity prediction indicated that the active compounds of <i>C. zanthorrhiza</i> were relatively nontoxic because beta-curcumene, curcumin, and xanthorrizol belong to toxicity classes 4 or 5. These findings suggest that the bioactive compounds of <i>C. zanthorrhiza</i> could be promising candidates for developing SIRT1 activators and NFκB inhibitors to combat T2DM.</p>","PeriodicalId":8999,"journal":{"name":"BioTechnologia","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/8e/34/BTA-104-2-50643.PMC10323740.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"BioTechnologia","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.5114/bta.2023.127206","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0

Abstract

Type 2 diabetes mellitus (T2DM) is a metabolic disease with a high risk of complications and mortality. Novel T2DM therapeutic interventions are needed to combat this disease. This study aimed to identify pathways involved in T2DM and investigate sesquiterpenoid compounds from Curcuma zanthorrhiza that could act as SIRT1 activators and NFκB inhibitors. Protein-protein interaction and bioactive compound analysis were conducted using the STRING and STITCH databases, respectively. Molecular docking was used to determine the compounds' interactions with SIRT1 and NFκB, while toxicity prediction was performed using Protox II. The results showed that curcumin could act as a SIRT1 activator (4I5I, 4ZZJ, and 5BTR) and NFκB inhibitor on the p52 relB complex and p50-p65 heterodimer, while xanthorrhizol could function as an IκK inhibitor. The toxicity prediction indicated that the active compounds of C. zanthorrhiza were relatively nontoxic because beta-curcumene, curcumin, and xanthorrizol belong to toxicity classes 4 or 5. These findings suggest that the bioactive compounds of C. zanthorrhiza could be promising candidates for developing SIRT1 activators and NFκB inhibitors to combat T2DM.

Abstract Image

Abstract Image

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
莪术中靶向SIRT1和NFκB生物活性化合物的计算评价。
2型糖尿病(T2DM)是一种并发症和死亡率高的代谢性疾病。需要新的T2DM治疗干预措施来对抗这种疾病。本研究旨在确定T2DM的相关途径,并研究莪术中可作为SIRT1激活剂和NFκB抑制剂的倍半萜类化合物。蛋白-蛋白相互作用和生物活性化合物分析分别使用STRING和STITCH数据库。通过分子对接确定化合物与SIRT1和NFκB的相互作用,并使用Protox II进行毒性预测。结果表明,姜黄素可作为SIRT1激活剂(4I5I、4ZZJ和5BTR)和nf - κ b抑制剂抑制p52 relB复合物和p50-p65异源二聚体,而黄菌素可作为i - κ k抑制剂。毒力预测结果表明,由于-姜黄素、姜黄素和黄索唑的毒性分别为4级和5级,故其活性成分相对无毒。这些发现表明,zanthorrhiza的生物活性化合物可能是开发SIRT1激活剂和NFκB抑制剂来对抗T2DM的有希望的候选者。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
BioTechnologia
BioTechnologia Agricultural and Biological Sciences-Plant Science
CiteScore
1.60
自引率
0.00%
发文量
8
审稿时长
8 weeks
期刊介绍: BIOTECHNOLOGIA – a high standard, peer-reviewed, quarterly magazine, providing a medium for the rapid publication of research reports and review articles on novel and innovative aspects of biotechnology, computational biology and bionanotechnology.
期刊最新文献
The utilization of microbes for sustainable food production. Optimization of mycelial growth and cultivation of wild Ganoderma sinense. Mycoremediation of anthraquinone dyes from textile industries: a mini-review. Influence of the autochthonous cellulolytic bacteria on the domestic compost process improvement. Regulation of GMO field trials in the EU and new genomic techniques: will the planned reform facilitate experimenting with gene-edited plants?
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1