Crystal structure of MAB_4123, a putative flavin-dependent monooxygenase from Mycobacterium abscessus

IF 1.1 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS Acta crystallographica. Section F, Structural biology communications Pub Date : 2023-05-03 DOI:10.1107/S2053230X2300345X
Kien Lam Ung, Chloé Poussineau, Julie Couston, Husam M. A. B. Alsarraf, Mickaël Blaise
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Abstract

Numerous bacteria from different phylae can perform desulfurization reactions of organosulfur compounds. In these degradation or detoxification pathways, two-component flavin-dependent monooxygenases that use flavins (FMN or FAD) as a cofactor play important roles as they catalyse the first steps of these metabolic routes. The TdsC or DszC and MsuC proteins belong to this class of enzymes as they process dibenzothiophene (DBT) and methanesulfinate. Elucidation of their X-ray structures in apo, ligand-bound and cofactor-bound forms has provided important molecular insights into their catalytic reaction. Mycobacterial species have also been shown to possess a DBT degradation pathway, but no structural information is available on these two-component flavin-dependent monooxygenases. In this study, the crystal structure of the uncharacterized MAB_4123 protein from the human pathogen Mycobacterium abscessus is presented. The structure solved at high resolution displays high similarity to homologs from Rhodococcus, Paenibacillus and Pseudomonas species. In silico docking approaches suggest that MAB_4123 binds FMN and may use it as a cofactor. Structural analysis strongly suggests that MAB_4123 is a two-component flavin-dependent monooxygenase that could act as a detoxifying enzyme of organosulfur compounds in mycobacteria.

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推测来自脓肿分枝杆菌黄素依赖性单加氧酶MAB_4123的晶体结构
来自不同门的许多细菌可以进行有机硫化合物的脱硫反应。在这些降解或解毒途径中,使用黄素(FMN或FAD)作为辅因子的双组分黄素依赖性单加氧酶在催化这些代谢途径的第一步时发挥着重要作用。TdsC或DszC和MsuC蛋白属于这类酶,因为它们处理二苯并噻吩(DBT)和甲磺酸盐。它们的apo、配体结合和辅因子结合形式的X射线结构的阐明为它们的催化反应提供了重要的分子见解。分枝杆菌物种也被证明具有DBT降解途径,但没有关于这些双组分黄素依赖性单加氧酶的结构信息。在本研究中,介绍了来自人类病原体脓肿分枝杆菌的未鉴定的MAB_4123蛋白的晶体结构。以高分辨率求解的结构显示出与来自红球菌、Paenibacillus和假单胞菌物种的同源物高度相似。计算机对接方法表明MAB_4123与FMN结合,并可能将其用作辅因子。结构分析有力地表明,MAB_4123是一种双组分黄素依赖性单加氧酶,可作为分枝杆菌中有机硫化合物的解毒酶。
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来源期刊
Acta crystallographica. Section F, Structural biology communications
Acta crystallographica. Section F, Structural biology communications BIOCHEMICAL RESEARCH METHODSBIOCHEMISTRY &-BIOCHEMISTRY & MOLECULAR BIOLOGY
CiteScore
1.90
自引率
0.00%
发文量
95
期刊介绍: Acta Crystallographica Section F is a rapid structural biology communications journal. Articles on any aspect of structural biology, including structures determined using high-throughput methods or from iterative studies such as those used in the pharmaceutical industry, are welcomed by the journal. The journal offers the option of open access, and all communications benefit from unlimited free use of colour illustrations and no page charges. Authors are encouraged to submit multimedia content for publication with their articles. Acta Cryst. F has a dedicated online tool called publBio that is designed to make the preparation and submission of articles easier for authors.
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