Analysis of tafazzin and deoxyribonuclease 1 like 1 transcripts and X chromosome sequencing in the evaluation of the effect of mosaicism in the TAZ gene on phenotypes in a family affected by Barth syndrome

IF 1.5 4区 医学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Mutation Research-Fundamental and Molecular Mechanisms of Mutagenesis Pub Date : 2023-01-01 DOI:10.1016/j.mrfmmm.2022.111812
Teresa Płatek , Maria Sordyl , Anna Polus , Agnieszka Olszanecka , Sławomir Kroczka , Bogdan Solnica
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引用次数: 1

Abstract

Barth syndrome is a rare disease affecting mitochondria structure and function in males. In our previous study, we have shown a new mutation (c.83T>A, p.Val28Glu) in the TAZ gene in two affected patients with congenital cardiomyopathy. Furthermore, women in this family had no mutations in their blood cells, whereas they only had mutations in the oral epithelial cells. The objective of the project was to evaluate the effect of intertissue mosaicisms on the Barth syndrome phenotypes, searching for another disease-related loci on chromosome X and finally to assess the consequences of the mutation. We conducted the advanced genetic study including cytogenetic research (constitutional karyotyping in blood and fibroblasts), NGS sequencing (with custom chromosome X sequencing together with the evaluation of loss of heterozygosity (LOH) and aberrations (CNV) in the whole genome) in four different tissues and sequencing of tafazzin and deoxyribonuclease 1 like 1 transcripts. The presence of deletions within the 5′untranslated region of the TAZ gene and/or the noncoding regions of the DNASE1L1 gene were detected in several tissues. Whereas, there is no intertissue mosaicism regarding point mutation in TAZ gene in all investigated tissues in female carriers. Only the male patient presented biochemical markers and neurological symptoms of Barth syndrome. All the female carriers are healthy and have normal tafazzin and deoxyribonuclease 1 like 1 transcripts in 2 analyzed tissues. The conclusion of this study is that we cannot rule out or confirm mosaicism in the noncoding regions of TAZ or DNASE1L1 genes, but this is not clinically relevant in female carriers because they are healthy. Finally, it has been proven that mutation (c.83T>A, p.Val28Glu) is responsible for disease in males in this family.

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tafazzin和脱氧核糖核酸酶1样1转录物的分析和X染色体测序评估TAZ基因嵌合对Barth综合征家族表型的影响
Barth综合征是一种影响男性线粒体结构和功能的罕见疾病。在我们之前的研究中,我们在两名先天性心肌病患者的TAZ基因中发现了一个新的突变(c.83T>;a,p.Val28Glu)。此外,这个家族的女性血细胞没有突变,而她们只有口腔上皮细胞的突变。该项目的目的是评估组织间嵌合对Barth综合征表型的影响,在X染色体上寻找另一个与疾病相关的基因座,并最终评估突变的后果。我们进行了高级遗传学研究,包括细胞遗传学研究(血液和成纤维细胞的组成核型分析)、四种不同组织的NGS测序(使用定制的X染色体测序以及全基因组杂合性(LOH)和畸变(CNV)的评估),以及tafazzin和脱氧核糖核酸酶1样1转录物的测序。在几个组织中检测到TAZ基因的5′非翻译区和/或DNASE1L1基因的非编码区内存在缺失。然而,在女性携带者的所有研究组织中,没有关于TAZ基因点突变的组织间嵌合体。只有男性患者出现Barth综合征的生化标志物和神经系统症状。所有女性携带者都是健康的,并且在2个分析的组织中具有正常的tafazzin和脱氧核糖核酸酶1样1转录物。这项研究的结论是,我们不能排除或证实TAZ或DNASE1L1基因非编码区的嵌合体,但这与女性携带者的临床无关,因为她们是健康的。最后,已经证明突变(c.83T>;A,p.Val28Glu)是该家族男性疾病的原因。
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来源期刊
CiteScore
4.90
自引率
0.00%
发文量
24
审稿时长
51 days
期刊介绍: Mutation Research (MR) provides a platform for publishing all aspects of DNA mutations and epimutations, from basic evolutionary aspects to translational applications in genetic and epigenetic diagnostics and therapy. Mutations are defined as all possible alterations in DNA sequence and sequence organization, from point mutations to genome structural variation, chromosomal aberrations and aneuploidy. Epimutations are defined as alterations in the epigenome, i.e., changes in DNA methylation, histone modification and small regulatory RNAs. MR publishes articles in the following areas: Of special interest are basic mechanisms through which DNA damage and mutations impact development and differentiation, stem cell biology and cell fate in general, including various forms of cell death and cellular senescence. The study of genome instability in human molecular epidemiology and in relation to complex phenotypes, such as human disease, is considered a growing area of importance. Mechanisms of (epi)mutation induction, for example, during DNA repair, replication or recombination; novel methods of (epi)mutation detection, with a focus on ultra-high-throughput sequencing. Landscape of somatic mutations and epimutations in cancer and aging. Role of de novo mutations in human disease and aging; mutations in population genomics. Interactions between mutations and epimutations. The role of epimutations in chromatin structure and function. Mitochondrial DNA mutations and their consequences in terms of human disease and aging. Novel ways to generate mutations and epimutations in cell lines and animal models.
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