β1,3-galactosyltransferase on chromosome 6 is essential for the formation of Lewis a structure on N-glycan in Oryza sativa.

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2023-10-01 Epub Date: 2023-08-04 DOI:10.1007/s11248-023-00360-y
Jae-Wan Jung, Seong-Ryong Kim
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Abstract

β1,3-galactose is the component of outer-chain elongation of complex N-glycans that, together with α1,4-fucose, forms Lewis a structures in plants. Previous studies have revealed that N-glycan maturation is mediated by sequential attachment of β1,3-galactose and α1,4-fucose by individual β1,3-galactosyltransferase (GalT) and α1,4-fucosyltransferase (1,4-FucT), respectively. Although GalT from several species has been studied, little information about GalT from rice is available. I therefore characterized three GalT candidate genes on different chromosomes in Oryza sativa. Seeds of rice lines that had T-DNA insertions in regions corresponding to individual putative GalT genes were obtained from a Rice Functional Genomic Express Database and plants grown until maturity. Homozygotes were selected from the next generation by genotyping PCR, and used for callus induction. Callus extracts of two independent T-DNA mutant rice which have T-DNA insertions at the same gene on chromosome 6 but in different exons showed highly reduced band intensity on a western blots using an anti-Lewis a antibody. Cell extracts and cultured media from suspension culture of the one of these mutant rice were further analysed by N-glycan profiling using matrix-associated laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF). Identified N-glycan species containing β1,3-galactose from both cell extracts and cultured media of knock-out mutant were less than 0.5% of total N-glycans while that of WT cells were 9.8% and 49.1%, respectively. This suggests that GalT located on rice chromosome 6 plays a major role in N-glycan galactosylation, and mutations within it lead to blockage of Lewis a epitope formation.

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6号染色体上的β1,3-半乳糖基转移酶对水稻N-聚糖上Lewis a结构的形成至关重要。
β1,3-半乳糖是复杂N-聚糖外链延伸的成分,该聚糖与α1,4-岩藻糖一起在植物中形成Lewis a结构。先前的研究表明,N-聚糖的成熟是由单个β1,3-半乳糖基转移酶(GalT)和α1,4-岩藻糖基转移酶类(1,4-FuccT)分别对β1,3-半乳糖和α1,4岩藻糖的顺序连接介导的。尽管已经对几种物种的GalT进行了研究,但关于水稻GalT的信息很少。因此,我鉴定了水稻不同染色体上的三个GalT候选基因。从水稻功能基因组表达数据库和生长至成熟的植物中获得在对应于单个推定GalT基因的区域中具有T-DNA插入的水稻系的种子。通过基因分型PCR从下一代中筛选出同卵,并用于愈伤组织诱导。两个独立的T-DNA突变体水稻的愈伤组织提取物在使用抗Lewis a抗体的western印迹上显示出高度降低的条带强度,这两个突变体水稻在6号染色体上的同一基因处具有T-DNA插入,但在不同的外显子中。通过使用基质相关激光解吸/电离飞行时间质谱(MALDI-TOF)的N-聚糖图谱,进一步分析来自这些突变水稻之一的悬浮培养的细胞提取物和培养基。从敲除突变体的细胞提取物和培养基中鉴定的含有β1,3-半乳糖的N-聚糖种类均小于总N-聚糖的0.5%,而WT细胞的N-聚糖含量分别为9.8%和49.1%。这表明,位于水稻6号染色体上的GalT在N-聚糖半乳糖基化中起着主要作用,其内的突变导致Lewis a表位形成受阻。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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