Symmetrical distributions of aminoacyl-tRNA synthetases during the evolution of the genetic code.

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2023-09-01 DOI:10.1007/s12064-023-00394-0
Marco V José, Juan R Bobadilla, Gabriel S Zamudio, Sávio Torres de Farías
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Abstract

In this work, we formulate the following question: How the distribution of aminoacyl-tRNA synthetases (aaRSs) went from an ancestral bidirectional gene (mirror symmetry) to the symmetrical distribution of aaRSs in a six-dimensional hypercube of the Standard Genetic Code (SGC)? We assume a primeval RNY code, two Extended Genetic RNA codes type 1 and 2, and the SGC. We outline the types of symmetries of the distribution of aaRSs in each code. The symmetry groups of aaRSs in each code are described, until the symmetries of the SGC display a mirror symmetry. Considering both Extended RNA codes the 20 aaRSs were already present before the Last Universal Ancestor. These findings reveal intricacies in the diversification of aaRSs accompanied by the evolution of the genetic code.

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遗传密码进化过程中氨基酸- trna合成酶的对称分布。
在这项工作中,我们提出了以下问题:氨基酰基trna合成酶(aaRSs)的分布如何从祖先的双向基因(镜像对称)到aaRSs在标准遗传密码(SGC)的六维超立方体中的对称分布?我们假设一个原始RNY编码,两个扩展遗传RNA编码类型1和2,以及SGC。我们概述了每个代码中aars分布的对称性类型。在每个代码中描述aars的对称群,直到SGC的对称性显示镜像对称。考虑到这两个扩展RNA编码,20个aars在最后的普遍祖先之前就已经存在了。这些发现揭示了遗传密码进化过程中aars多样化的复杂性。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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