硅学鉴定α-双香叶醇和letestuianin C作为布氏锥虫硫胺素还原酶的潜在抑制剂。

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular Structure & Dynamics Pub Date : 2024-10-01 Epub Date: 2023-08-16 DOI:10.1080/07391102.2023.2247084
Prisca Baah Nketia, Edward Ntim Gasu, Jehoshaphat Oppong Mensah, Lawrence Sheringham Borquaye
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引用次数: 0

摘要

尽管近来药物研究取得了进展,但找到一种安全、有效且易于使用的化疗方法来治疗人类非洲锥虫病(HAT)仍然是一项具有挑战性的任务。锥虫对美拉索洛尔(目前的首选药物)产生了抗药性,而且美拉索洛尔有毒,这也是一个问题。因此,迫切需要寻找针对寄生虫的替代疗法。天然产品为药物发现提供了潜力,但人们对其抑制靶点或可能的抑制模式知之甚少或一无所知。因此,本研究旨在利用分子对接和分子动力学模拟来评估 30 种抗锥虫天然产物作为锥硫蛋白还原酶潜在抑制剂的潜力,锥硫蛋白还原酶是布氏锥虫生存所必需的关键蛋白。研究还评估了最有前景的化合物的药代动力学特性。在所评估的化合物中,α-bisabolol、letestuianin C、waltherione 和 mexicanin E 被发现能与 TR 的活性位点结合,并与 Met115、Tyr112 和 Trp23 相互作用,而 Met115、Tyr112 和 Trp23 对酶的运作至关重要。分子动态模拟显示,α-双羟基苯酚和 letestuianin C 在整个模拟期间持续结合,有可能阻碍底物(T[S]2)的结合并妨碍催化。这些化合物与 TR 的结合导致酶的活性位点出现溶剂分子,这有可能导致蛋白质聚集。此外,α-双羟基苯乙醇和 Letestuianin C 表现出良好的安全性。因此,α-双羟基苯乙醇和来曲霉素 C 被证明是针对非洲锥虫病的锥硫还原酶的可行候选药物。
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In silico identification of α-bisabolol and letestuianin C as potential inhibitors of Trypanosoma brucei trypanothione reductase.

Despite the recent advances in drug research, finding a safe, effective, and easy to use chemotherapy for human African trypanosomiasis (HAT) remains a challenging task. Trypanosomatids have developed resistance mechanisms towards melarsoprol (the current drug of choice), and the fact that it is poisonous is problematic. Therefore, a search for alternative therapeutics against the parasite is urgently needed. Natural products offer potential for drug discovery, but little or nothing is known about the target of inhibition or possible mode of inhibition. Therefore, this study aimed to use molecular docking and molecular dynamics simulations to evaluate 30 antitrypanosomal natural products as potential inhibitors of trypanothione reductase, a key protein necessary for the survival of the Trypanosoma brucei. The study also assessed the pharmacokinetic properties of the most promising compounds. Of the compounds evaluated, α-bisabolol, letestuianin C, waltherione, and mexicanin E were found to bind at the active site of TR and interact with Met115, Tyr112, and Trp23, which are essential for enzyme functioning. Molecular dynamic simulations revealed the sustained binding of α-bisabolol and letestuianin C throughout the simulation period, potentially obstructing the binding of the substrate (T[S]2) and impeding catalysis. The binding of these compounds to TR led to the presence of solvent molecules in the enzyme's active site, and this could potentially lead to protein aggregation. Furthermore, α-bisabolol and letestuianin C exhibited promising safety profiles. Consequently, α-bisabolol and letestuianin C have been shown to be viable candidates for targeting trypanothione reductase in the fight against human African trypanosomiasis.Communicated by Ramaswamy H. Sarma.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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