光遗传学对组织生长和形态发生的定量见解。

IF 2 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Physical biology Pub Date : 2023-09-28 DOI:10.1088/1478-3975/acf7a1
Mayesha Sahir Mim, Caroline Knight, Jeremiah J Zartman
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引用次数: 0

摘要

在细胞分化和组织形态发生过程中,细胞相互交流,共同调节细胞过程。这种多尺度协调是通过形态发生素的时空活性来模式化细胞信号传导和转录因子活性而产生的。这些编码信息控制细胞力学、增殖和分化,以塑造器官的生长和形态发生。尽管许多分子组分和物理相互作用已经在关键的模型发育系统中得到了鉴定,但由于在精确干扰和定量测量信号动力学方面存在挑战,与所涉及的动力学相关的许多问题仍未解决。最近,已经开发并使用了广泛的合成光遗传学工具来定量定义信号转导和下游细胞反应之间的关系。这些光遗传学工具可以在单细胞或整个组织范围内控制细胞内活动,以指导随后的生物过程。在这篇简短的综述中,我们重点介绍了一组选定的研究,这些研究开发和实施了光遗传学工具,通过操纵形态发生素、信号转导级联和细胞力学,在广泛的生物系统中揭示组织生长和形态发生的定量生物物理机制。更普遍地说,我们讨论了光遗传学工具是如何成为探测和控制多细胞发育的强大平台的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Quantitative insights in tissue growth and morphogenesis with optogenetics.

Cells communicate with each other to jointly regulate cellular processes during cellular differentiation and tissue morphogenesis. This multiscale coordination arises through the spatiotemporal activity of morphogens to pattern cell signaling and transcriptional factor activity. This coded information controls cell mechanics, proliferation, and differentiation to shape the growth and morphogenesis of organs. While many of the molecular components and physical interactions have been identified in key model developmental systems, there are still many unresolved questions related to the dynamics involved due to challenges in precisely perturbing and quantitatively measuring signaling dynamics. Recently, a broad range of synthetic optogenetic tools have been developed and employed to quantitatively define relationships between signal transduction and downstream cellular responses. These optogenetic tools can control intracellular activities at the single cell or whole tissue scale to direct subsequent biological processes. In this brief review, we highlight a selected set of studies that develop and implement optogenetic tools to unravel quantitative biophysical mechanisms for tissue growth and morphogenesis across a broad range of biological systems through the manipulation of morphogens, signal transduction cascades, and cell mechanics. More generally, we discuss how optogenetic tools have emerged as a powerful platform for probing and controlling multicellular development.

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来源期刊
Physical biology
Physical biology 生物-生物物理
CiteScore
4.20
自引率
0.00%
发文量
50
审稿时长
3 months
期刊介绍: Physical Biology publishes articles in the broad interdisciplinary field bridging biology with the physical sciences and engineering. This journal focuses on research in which quantitative approaches – experimental, theoretical and modeling – lead to new insights into biological systems at all scales of space and time, and all levels of organizational complexity. Physical Biology accepts contributions from a wide range of biological sub-fields, including topics such as: molecular biophysics, including single molecule studies, protein-protein and protein-DNA interactions subcellular structures, organelle dynamics, membranes, protein assemblies, chromosome structure intracellular processes, e.g. cytoskeleton dynamics, cellular transport, cell division systems biology, e.g. signaling, gene regulation and metabolic networks cells and their microenvironment, e.g. cell mechanics and motility, chemotaxis, extracellular matrix, biofilms cell-material interactions, e.g. biointerfaces, electrical stimulation and sensing, endocytosis cell-cell interactions, cell aggregates, organoids, tissues and organs developmental dynamics, including pattern formation and morphogenesis physical and evolutionary aspects of disease, e.g. cancer progression, amyloid formation neuronal systems, including information processing by networks, memory and learning population dynamics, ecology, and evolution collective action and emergence of collective phenomena.
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