基于硅学研究和网络药理学的方法探索 Tecteria coadunata (Wall.) C. Chr.

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular Structure & Dynamics Pub Date : 2024-11-01 Epub Date: 2023-09-01 DOI:10.1080/07391102.2023.2252091
Shraddha Ram, Pallavi More-Adate, Amol A Tagalpallewar, Anil T Pawar, Shuchi Nagar, Akshay M Baheti
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引用次数: 0

摘要

不受控制的细胞增殖是癌症的常见定义。乳腺癌是仅次于肺癌的第二大癌症。大多数乳腺癌细胞和健康的乳腺细胞都有循环雌激素和孕激素的受体。为了促进癌细胞的发育和分裂,雌激素和孕激素与受体结合,并可能与生长因子(如癌基因和突变的肿瘤抑制基因)协同作用。根据文献记载,Tecteria coadunata (Wall.) C. Chr.具有抗癌、抗氧化和抗炎潜力。在对这种根茎进行水醇提取后,HR-LCMS 分析共提取出 200 种植物化学物质。本研究使用 Cytoscape 软件,利用不同的数据库,开展了网络药理学研究,以探索 Tecteria coadunata (Wall.) C. Chr.该网络描述了生物活性物质与其靶点的相互作用,以及它们与多种疾病(尤其是乳腺癌)的关联。Tecteria coadunata (Wall.) C. Chr.提供了与各种基因的新关系,并将其应用于不同类型的乳腺癌。进一步的基因本体研究表明,其主要靶标是 TP53、BRCA2、PGR 和 CHEK 2。使用 Flex-X 软件进行了分子对接研究,结果表明多巴黄质、丹曲林和乌洛托品与关键靶标的结合亲和力最高。此外,药代动力学分析表明,所有前三个先导化合物都遵循利宾斯基法则(三人法则),在不影响生物利用度的条件下,毒性最小。
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An in-silico investigation and network pharmacology based approach to explore the anti-breast-cancer potential of Tecteria coadunata (Wall.) C. Chr.

Uncontrolled cell proliferation is a common definition of cancer. After lung carcinoma, breast neoplasm is the second-most prevalent kind of cancer. The majority of breast cancer cells and healthy breast cells both have receptors for circulating oestrogen and progesterone. In order to promote the development and division of cancer cells, oestrogen and progesterone bind to the receptors and may collaborate with growth factors (such as oncogenes and mutant tumour suppressor genes). As per the literature, Tecteria coadunata (Wall.) C. Chr. has anticancer, antioxidant and anti-inflammatory potential. After the hydroalcoholic extraction of this rhizome, total of 200 phytochemicals were retrieved from HR-LCMS analysis. In this current study, Network pharmacology was carried out to explore the rationale of Tecteria coadunata (Wall.) C. Chr. by using different database using Cytoscape software. The network depicted the interaction of Bioactives with their targets and their association with several disease, especially breast cancer. Tecteria coadunata (Wall.) C. Chr. has offered new relationship with variety of genes and its applications in different types of breast cancers. Further Gene Ontology was carried out and it showed key targets were TP53, BRCA2, PGR and CHEK 2. Further Signalling pathways were also enriched. Flex-X software was used for molecular docking studies, and it verified that Dopaxanthin, Dantrolene and Orotidin shows the highest binding affinities with key targets. Additionally, Pharmacokinetic analysis revealed that all top three lead compounds which follows the Lipinski Rule (Rule of three) without interrupting the conditions of bioavailability with minimal toxicity.Communicated by Ramaswamy H. Sarma.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
期刊最新文献
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