使用靶向小组和下一代测序重新评估帕金森病的遗传变异。

IF 1 4区 医学 Q4 GENETICS & HEREDITY Twin Research and Human Genetics Pub Date : 2023-04-01 DOI:10.1017/thg.2023.14
Ahmet Kablan, Fatma Silan, Ozturk Ozdemir
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引用次数: 0

摘要

帕金森病(PD)是一种具有重要遗传成分的复杂疾病。与PD相关的遗传变异在疾病的遗传和预后中起着至关重要的作用。目前,在OMIM数据库中已经有31个基因与PD相关联,并且发现的基因和遗传变异数量正在稳步增加。为了建立表型和基因型之间强有力的相关性,有必要将研究结果与现有文献进行比较。在这项研究中,我们旨在利用下一代测序(NGS)技术的靶向基因面板识别与PD相关的遗传变异。我们的目的也是探索重新分析未知意义遗传变异(VUS)的想法。我们在2018-2019年期间使用NGS筛选了43名门诊患者的18个已知与PD相关的基因。12-24个月后,我们重新评估检测到的变异。我们在14个非近亲家庭的个体中发现了14种不同的杂合变异体,分类为致病性、可能致病性或VUS。我们重新评估了15个变体,发现它们的解释发生了变化。NGS的靶向基因面板分析可以帮助确定与PD相关的遗传变异。在特定的时间间隔重新分析某些变量在特定的情况下特别有益。我们的研究旨在扩大PD的临床和遗传学认识,并强调重新分析的重要性。
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Re-evaluation of Genetic Variants in Parkinson's Disease Using Targeted Panel and Next-Generation Sequencing.

Parkinson's disease (PD) is a complex disorder with a significant genetic component. Genetic variations associated with PD play a crucial role in the disease's inheritance and prognosis. Currently, 31 genes have been linked to PD in the OMIM database, and the number of genes and genetic variations identified is steadily increasing. To establish a robust correlation between phenotype and genotype, it is essential to compare research findings with existing literature. In this study, we aimed to identify genetic variants associated with PD using a targeted gene panel with next-generation sequencing (NGS) technology. Our objective was also to explore the idea of re-analyzing genetic variants of unknown significance (VUS). We screened 18 genes known to be related to PD using NGS in 43 patients who visited our outpatient clinic between 2018-2019. After 12-24 months, we re-evaluated the detected variants. We found 14 different heterozygous variants classified as pathogenic, likely pathogenic, or VUS in 14 individuals from nonconsanguineous families. We re-evaluated 15 variants and found changes in their interpretation. Targeted gene panel analysis with NGS can help identify genetic variants associated with PD with confidence. Re-analyzing certain variants at specific time intervals can be especially beneficial in selected situations. Our study aims to expand the clinical and genetic understanding of PD and emphasizes the importance of re-analysis.

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来源期刊
Twin Research and Human Genetics
Twin Research and Human Genetics 医学-妇产科学
CiteScore
1.50
自引率
11.10%
发文量
37
审稿时长
6-12 weeks
期刊介绍: Twin Research and Human Genetics is the official journal of the International Society for Twin Studies. Twin Research and Human Genetics covers all areas of human genetics with an emphasis on twin studies, genetic epidemiology, psychiatric and behavioral genetics, and research on multiple births in the fields of epidemiology, genetics, endocrinology, fetal pathology, obstetrics and pediatrics. Through Twin Research and Human Genetics the society aims to publish the latest research developments in twin studies throughout the world.
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