结肠腺癌中一种新的铜中毒相关基因预后标志。

IF 1.7 4区 医学 Q3 PHARMACOLOGY & PHARMACY Canadian journal of physiology and pharmacology Pub Date : 2023-11-01 Epub Date: 2023-09-12 DOI:10.1139/cjpp-2023-0118
Yongqin Su, Kun Zhang
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引用次数: 0

摘要

杯状细胞病是由线粒体依赖性能量代谢增强引起的最新细胞死亡类型。本研究计划建立一个基于铜中毒相关基因(CRGs)的结肠癌(COAD)患者生存预后模型。我们基于癌症基因组图谱数据库研究了COAD中CRG的遗传变化,并在GSE41328数据集中进行了验证。我们的结果显示,LIPT1、PDHA1、GLS和CDKN2A在COAD组织中的表达明显高于正常组织,而FDX1、DLD和MTF1在COAD中的表达显著低于正常组织(|(log2(倍数变化))|>2,p=0.037)和CDKN2A(HR:1.785;95%可信区间:1.200,2.654;p=0.004)的表达与整个对数秩检验的总生存率有关。CRG预后评分在1、3和5年时的曲线下面积分别为0.737、0.646和0.633。具有高危因素的患者预后不良(HR=1.514;95%可信区间:1.022,2.243;p=0.0386)。独立验证数据集(GSE41328(N=20))证实了上述结果。CRGs的特征可以作为COAD患者的预后预测指标,为抗癌治疗提供独特的见解。
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A novel cuproptosis-related gene prognostic signature in colon adenocarcinoma.

Cuproptosis is the latest cell death type caused by enhanced mitochondrial-dependent energy metabolism. This study plans to establish a survival prognosis model for colon adenocarcinoma (COAD) patients based on cuproptosis-related genes (CRGs). We investigated the genetic alterations of CRGs in COAD based on The Cancer Genome Atlas database and validated in the GSE41328 dataset. Our results showed that LIPT1, PDHA1, GLS, and CDKN2A had significantly higher expression in COAD tissues than in normal tissues, while FDX1, DLD, and MTF1 had significantly lower expression in COAD tissues than in normal tissues (|(log2(fold change))| > 2, p < 0.05). DLD (hazard ratio (HR): 0.658; 95% confidence interval (CI): 0.445, 0.974; p = 0.037) and CDKN2A (HR: 1.785; 95% CI: 1.200, 2.654; p = 0.004) expressions were linked with overall survival throughout a log-rank test. CRG prognostic scores exhibited an area under the curve of 0.737, 0.646, and 0.633 at 1, 3, and 5 years. Patients with a high-risk factor suffered from poor prognosis (HR = 1.514; 95% CI: 1.022, 2.243; p = 0.0386). An independent validation dataset (GSE41328 (N = 20)) confirmed the above results. The CRGs' signature may be used as a prognostic predictor for COAD patients, providing unique insights into anticancer therapy.

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来源期刊
CiteScore
4.00
自引率
4.80%
发文量
90
审稿时长
3-8 weeks
期刊介绍: Published since 1929, the Canadian Journal of Physiology and Pharmacology is a monthly journal that reports current research in all aspects of physiology, nutrition, pharmacology, and toxicology, contributed by recognized experts and scientists. It publishes symposium reviews and award lectures and occasionally dedicates entire issues or portions of issues to subjects of special interest to its international readership. The journal periodically publishes a “Made In Canada” special section that features invited review articles from internationally recognized scientists who have received some of their training in Canada.
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