反阴离子呈现的弱相互作用扰动酪氨酸酶模拟过氧化二铜的稳定性(II)活性位点:解开的计算指标

IF 3.5 3区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Chemistry - An Asian Journal Pub Date : 2023-09-07 DOI:10.1002/asia.202300688
Sumangla Arora, Dr. Puneet Gupta
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引用次数: 0

摘要

文献中观察到,在PhCO2−、CF3SO3−、TsO−和SbF6−等反阴离子(CA)的存在下,模拟μ-η2:η2-过氧二铜(II)(P)的酪氨酸酶的稳定性会受到干扰。在这项工作中,我们使用密度泛函理论来筛选和研究实验报道的情况下P的稳定性,从而解开计算指标。这些指标是吉布斯能量、几何参数(如距离和角度)、基于Hirshfeld分区(IGMH)生成的数据的独立梯度模型、轨道的重叠和畸变相互作用(DI)能量。DFT计算的吉布斯能表明,在PhCO2−和TsO−的情况下,P是稳定的。CF3SO3−允许P及其等电子物种双-μ-氧代双铜(O)共存。SbF6−表明O过量。我们的指标表明,在PhCO2−和TsO−的情况下,P的稳定性是由于P及其CA的更好位置,从而导致更好的相互作用和轨道重叠。其他指示器显示,与其他两种情况下的平面相比,在PhCO2−和TsO−情况下,P中Cu2O2核心的平面更弯曲。此外,在PhCO2−和TsO−的情况下,基于IGMH的指示器显示的值高于其他CA。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Counter-Anions Rendered Weak-Interactions Perturb the Stability of Tyrosinase-Mimicked Peroxo-Dicopper(II) Active Site: Unraveling Computational Indicators

It has been observed in literature that the stability of tyrosinase-mimicked μ-η22-peroxo-dicopper(II) (P) can be perturbed in presence of counter-anions (CAs) such as PhCO2, CF3SO3, TsO and SbF6. In this work, we unravel computational indicators using density functional theory to screen and study the stability of P in experimentally-reported cases. These indicators are Gibbs energies, geometrical parameters such as distances and angles, independent gradient model based on Hirshfeld partition (IGMH) generated data, orbitals’ overlap, and distortion-interaction (DI) energies. Our DFT computed Gibbs energies indicate that P is stable in case of PhCO2 and TsO. CF3SO3 allows P and its isoelectronic species bis-μ-oxo-dicopper (O) to coexist. SbF6 shows that O is in excess. Our indicators reveal that the stability of P in case of PhCO2 and TsO is due to the better placing of P and its CA, thus leading to better interactions and overlap of orbitals. Other indicator displays that the plane of Cu2O2 core in P is more bend in PhCO2 and TsO cases as compared to the plane in the other two cases. In addition, the IGMH-based indicator displays higher values in the case of PhCO2 and TsO than the other CAs.

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来源期刊
Chemistry - An Asian Journal
Chemistry - An Asian Journal 化学-化学综合
CiteScore
7.00
自引率
2.40%
发文量
535
审稿时长
1.3 months
期刊介绍: Chemistry—An Asian Journal is an international high-impact journal for chemistry in its broadest sense. The journal covers all aspects of chemistry from biochemistry through organic and inorganic chemistry to physical chemistry, including interdisciplinary topics. Chemistry—An Asian Journal publishes Full Papers, Communications, and Focus Reviews. A professional editorial team headed by Dr. Theresa Kueckmann and an Editorial Board (headed by Professor Susumu Kitagawa) ensure the highest quality of the peer-review process, the contents and the production of the journal. Chemistry—An Asian Journal is published on behalf of the Asian Chemical Editorial Society (ACES), an association of numerous Asian chemical societies, and supported by the Gesellschaft Deutscher Chemiker (GDCh, German Chemical Society), ChemPubSoc Europe, and the Federation of Asian Chemical Societies (FACS).
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