基于ResNet18的富亮氨酸胶质瘤失活1抗体脑炎与γ -氨基丁酸B受体抗体脑炎的鉴别

4区 计算机科学 Q1 Arts and Humanities Visual Computing for Industry, Biomedicine, and Art Pub Date : 2023-08-18 DOI:10.1186/s42492-023-00144-5
Jian Pan, Ruijuan Lv, Qun Wang, Xiaobin Zhao, Jiangang Liu, Lin Ai
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引用次数: 0

摘要

本研究旨在利用卷积神经网络(CNN)模型区分富含亮氨酸的胶质瘤失活1 (LGI1)抗体脑炎和γ -氨基丁酸B (GABAB)受体抗体脑炎。这项研究共招募了81名患者。分别使用含有内侧颞叶(MTL)或基底神经节(BG)的3828张正电子发射断层扫描图像切片对ResNet18、VGG16和ResNet50进行训练和测试。在患者水平上使用留一交叉验证来评估CNN模型。生成接收者工作特征(ROC)曲线和ROC曲线下面积(AUC)来评价CNN模型。基于切片水平的预测结果,采用决策策略评估CNN模型在患者水平的性能。ResNet18模型在切片(AUC = 0.86,准确率= 80.28%)和患者水平(AUC = 0.98,准确率= 96.30%)上表现最佳。其中,在切片水平上,73.28%(1445/1972)的GABAB受体抗体脑炎图像切片和87.72%(1628/1856)的LGI1抗体脑炎图像切片被准确检测出来。在患者水平上,GABAB受体抗体脑炎患者的准确率为94.12% (16/17),LGI1抗体脑炎患者的准确率为96.88%(62/64)。使用梯度加权类激活映射提取的图像切片热图表明,该模型将重点放在MTL和BG上进行分类。总的来说,ResNet18模型是区分LGI1和GABAB受体抗体脑炎的潜在方法。MTL和BG的代谢是区分这两种脑炎亚型的重要指标。
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Discrimination between leucine-rich glioma-inactivated 1 antibody encephalitis and gamma-aminobutyric acid B receptor antibody encephalitis based on ResNet18.

This study aims to discriminate between leucine-rich glioma-inactivated 1 (LGI1) antibody encephalitis and gamma-aminobutyric acid B (GABAB) receptor antibody encephalitis using a convolutional neural network (CNN) model. A total of 81 patients were recruited for this study. ResNet18, VGG16, and ResNet50 were trained and tested separately using 3828 positron emission tomography image slices that contained the medial temporal lobe (MTL) or basal ganglia (BG). Leave-one-out cross-validation at the patient level was used to evaluate the CNN models. The receiver operating characteristic (ROC) curve and the area under the ROC curve (AUC) were generated to evaluate the CNN models. Based on the prediction results at slice level, a decision strategy was employed to evaluate the CNN models' performance at patient level. The ResNet18 model achieved the best performance at the slice (AUC = 0.86, accuracy = 80.28%) and patient levels (AUC = 0.98, accuracy = 96.30%). Specifically, at the slice level, 73.28% (1445/1972) of image slices with GABAB receptor antibody encephalitis and 87.72% (1628/1856) of image slices with LGI1 antibody encephalitis were accurately detected. At the patient level, 94.12% (16/17) of patients with GABAB receptor antibody encephalitis and 96.88% (62/64) of patients with LGI1 antibody encephalitis were accurately detected. Heatmaps of the image slices extracted using gradient-weighted class activation mapping indicated that the model focused on the MTL and BG for classification. In general, the ResNet18 model is a potential approach for discriminating between LGI1 and GABAB receptor antibody encephalitis. Metabolism in the MTL and BG is important for discriminating between these two encephalitis subtypes.

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来源期刊
Visual Computing for Industry, Biomedicine, and Art
Visual Computing for Industry, Biomedicine, and Art Arts and Humanities-Visual Arts and Performing Arts
CiteScore
5.60
自引率
0.00%
发文量
28
审稿时长
5 weeks
期刊最新文献
Discrimination between leucine-rich glioma-inactivated 1 antibody encephalitis and gamma-aminobutyric acid B receptor antibody encephalitis based on ResNet18. Hyperparameter optimization for cardiovascular disease data-driven prognostic system. Survey of methods and principles in three-dimensional reconstruction from two-dimensional medical images. Vision transformer architecture and applications in digital health: a tutorial and survey. DB-DCAFN: dual-branch deformable cross-attention fusion network for bacterial segmentation.
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