假结核棒状杆菌12CS0282的多组学和计算机反向疫苗学方法揭示了新的疫苗和药物靶点。

IF 4 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Proteomes Pub Date : 2022-11-23 DOI:10.3390/proteomes10040039
Jens Möller, Mona Bodenschatz, Vartul Sangal, Jörg Hofmann, Andreas Burkovski
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引用次数: 0

摘要

假结核棒状杆菌是一种重要的动物病原体,也能感染人类。目前还没有治疗这种病原体感染的最佳方法,因此,需要进行更多的研究来了解感染过程。在这里,我们提出了一种结合组学和生物信息学的方法来表征假结核杆菌12CS0282。测定菌株12CS0282的基因组序列,并与现有的130个假结核杆菌序列进行比较,作为蛋白质组学分析的基础。通过反向疫苗学方法,确定了12CS0208的推定疫苗和药物靶点。质谱分析显示,即使没有与宿主接触,也存在多种毒力因子。在巨噬细胞相互作用研究中,假结核杆菌12CS0282对人吞噬细胞具有高度耐药性,甚至在人THP-1细胞内繁殖。综上所述,这些数据表明该菌株具有很高的致病潜力。
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Multi-Omics of Corynebacterium Pseudotuberculosis 12CS0282 and an In Silico Reverse Vaccinology Approach Reveal Novel Vaccine and Drug Targets.

Corynebacterium pseudotuberculosis is an important animal pathogen, which is also able to infect humans. An optimal treatment of infections with this pathogen is not available today and consequently, more research is necessary to understand the infection process. Here, we present a combined -omics and bioinformatics approach to characterize C. pseudotuberculosis 12CS0282. The genome sequence of strain 12CS0282 was determined, analyzed in comparison with the available 130 C. pseudotuberculosis sequences and used as a basis for proteome analyses. In a reverse vaccinology approach, putative vaccine and drug targets for 12CS0208 were identified. Mass spectrometry analyses revealed the presence of multiple virulence factors even without host contact. In macrophage interaction studies, C. pseudotuberculosis 12CS0282 was highly resistant against human phagocytes and even multiplied within human THP-1 cells. Taken together, the data indicate a high pathogenic potential of the strain.

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来源期刊
Proteomes
Proteomes Biochemistry, Genetics and Molecular Biology-Clinical Biochemistry
CiteScore
6.50
自引率
3.00%
发文量
37
审稿时长
11 weeks
期刊介绍: Proteomes (ISSN 2227-7382) is an open access, peer reviewed journal on all aspects of proteome science. Proteomes covers the multi-disciplinary topics of structural and functional biology, protein chemistry, cell biology, methodology used for protein analysis, including mass spectrometry, protein arrays, bioinformatics, HTS assays, etc. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on the length of papers. Scope: -whole proteome analysis of any organism -disease/pharmaceutical studies -comparative proteomics -protein-ligand/protein interactions -structure/functional proteomics -gene expression -methodology -bioinformatics -applications of proteomics
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