物理数学规则支配内在无序的蛋白质。

IF 10.4 1区 生物学 Q1 BIOPHYSICS Annual Review of Biophysics Pub Date : 2022-05-09 DOI:10.1146/annurev-biophys-120221-095357
Kingshuk Ghosh, Jonathan Huihui, Michael Phillips, Austin Haider
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引用次数: 16

摘要

与具有独特折叠状态的可折叠蛋白质形成鲜明对比的是,内在无序蛋白质和区域(IDPs)持续存在于永久无序的集成中。然而,即使是平均而言,IDP集合也具有特定于其序列的构象特征。事实上,IDP序列的细微变化可以调节其构象特征和功能。理论物理学的最新进展揭示了一组优雅的数学表达式,这些表达式描述了IDP序列、它们的集合构象以及它们的生物功能调节之间的复杂关系。这些方程还描述了IDP序列的分子特性,预测了它们在功能上的相似性和差异性,并促进了按功能对序列的分类,这是传统生物信息学面临的一个未满足的挑战。当IDPs介导的多种新型功能模式正在出现时,这些物理序列模式指标为推进合成生物学提供了一条有希望的新途径。
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Rules of Physical Mathematics Govern Intrinsically Disordered Proteins.

In stark contrast to foldable proteins with a unique folded state, intrinsically disordered proteins and regions (IDPs) persist in perpetually disordered ensembles. Yet an IDP ensemble has conformational features-even when averaged-that are specific to its sequence. In fact, subtle changes in an IDP sequence can modulate its conformational features and its function. Recent advances in theoretical physics reveal a set of elegant mathematical expressions that describe the intricate relationships among IDP sequences, their ensemble conformations, and the regulation of their biological functions. These equations also describe the molecular properties of IDP sequences that predict similarities and dissimilarities in their functions and facilitate classification of sequences by function, an unmet challenge to traditional bioinformatics. These physical sequence-patterning metrics offer a promising new avenue for advancing synthetic biology at a time when multiple novel functional modes mediated by IDPs are emerging.

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来源期刊
Annual Review of Biophysics
Annual Review of Biophysics 生物-生物物理
CiteScore
21.00
自引率
0.00%
发文量
25
期刊介绍: The Annual Review of Biophysics, in publication since 1972, covers significant developments in the field of biophysics, including macromolecular structure, function and dynamics, theoretical and computational biophysics, molecular biophysics of the cell, physical systems biology, membrane biophysics, biotechnology, nanotechnology, and emerging techniques.
期刊最新文献
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