区间筛选生存数据的比例风险模型的惩罚似然估计。

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2022-11-01 DOI:10.1515/ijb-2020-0104
Jun Ma, Dominique-Laurent Couturier, Stephane Heritier, Ian C Marschner
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引用次数: 4

摘要

本文研究了半参数比例风险模型的拟合问题,其中观察到的生存时间包含事件时间,也包含间隔时间、左截时间和右截时间。虽然这不是一个新话题,但许多现有的方法都存在计算性能差的问题。在本文中,我们采用了一种更通用的惩罚似然法来同时估计基线风险和回归系数。基线危险度用基函数如m样条来近似。引入惩罚来规范基线危害估计,并减轻估计对基函数结点的依赖。我们提出了一个牛顿- mi(乘法迭代)算法来拟合这个模型。我们还提出了我们估计的新渐近性质,允许一些近似基线危险的参数可能位于参数空间边界上。通过深入的仿真研究,将我们的方法与其他类似方法进行了比较。结果表明,我们的方法非常稳定,几乎没有遇到数值问题。提出了一个涉及黑色素瘤复发的真实数据应用程序,并在R CRAN上提供了实现该方法的R包“survivalMPL”。
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Penalized likelihood estimation of the proportional hazards model for survival data with interval censoring.

This paper considers the problem of semi-parametric proportional hazards model fitting where observed survival times contain event times and also interval, left and right censoring times. Although this is not a new topic, many existing methods suffer from poor computational performance. In this paper, we adopt a more versatile penalized likelihood method to estimate the baseline hazard and the regression coefficients simultaneously. The baseline hazard is approximated using basis functions such as M-splines. A penalty is introduced to regularize the baseline hazard estimate and also to ease dependence of the estimates on the knots of the basis functions. We propose a Newton-MI (multiplicative iterative) algorithm to fit this model. We also present novel asymptotic properties of our estimates, allowing for the possibility that some parameters of the approximate baseline hazard may lie on the parameter space boundary. Comparisons of our method against other similar approaches are made through an intensive simulation study. Results demonstrate that our method is very stable and encounters virtually no numerical issues. A real data application involving melanoma recurrence is presented and an R package 'survivalMPL' implementing the method is available on R CRAN.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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