维京二号,一个全球观察队列的志愿者与北部岛屿祖先。

IF 1.6 Q3 HEALTH CARE SCIENCES & SERVICES International Journal of Population Data Science Pub Date : 2023-01-01 DOI:10.23889/ijpds.v8i1.2121
Shona M Kerr, Rachel Edwards, David Buchanan, John Dean, Zosia Miedzybrodzka, James F Wilson
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引用次数: 0

摘要

简介:VIKING II的目的是建立一个来自苏格兰北部群岛祖先的志愿者观察队列,主要是为了确定影响疾病的遗传变异。新的在线协议与之前在奥克尼岛和设得兰群岛孤立人群中进行的基于临床的遗传流行病学研究不同,但是在此基础上进行的。由于遗传漂变、大量亲缘关系和家谱信息的可用性,这些群体有利于研究罕见的遗传变异。众所周知,他们在基因上与英国本土人口不同。方法和分析:在线方法被用来招募大约4000人,他们有北岛血统,生活在世界任何地方。为参与者提供了可操作的遗传结果返回的选项。同意书将以电子方式提交。数据将在基线时通过在线问卷收集,并纵向通过与电子健康记录中的NHS数据联系收集。问卷收集了包括个人和家庭健康在内的各种表型。将从唾液样本中提取DNA,然后进行全基因组基因分型和外显子组测序。VIKING II旨在利用北岛人口的特殊特征来创建一个研究队列,该队列将有助于分析与广泛特征和疾病终点相关的遗传变异,包括在这些人群中漂移到高频的罕见变异。伦理和传播:东南苏格兰研究伦理委员会给予了这项研究有利的意见。维京II是由爱丁堡大学和洛锡安NHS赞助的。研究结果摘要将分发给参与者和供资机构,在会议上提出,并在同行评议的出版物中报告。文章摘要:本研究的优势和局限性研究志愿者具有独特血统的详细数据和生物样本收集。同意访问常规收集的临床电子病历数据和未来的再次接触,提供纵向组成部分。可选择同意返回可起诉的遗传结果。对于某些类型的遗传分析来说,4000名参与者是一个相对较小的数字,因此在一些研究设计中,队列本身的力量不足。维持队列、存储数据和DNA样本的资源非常重要,其可持续性取决于基础设施的支持和资金。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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VIKING II, a worldwide observational cohort of volunteers with northern isles ancestry.

Introduction: The purpose of VIKING II is to create an observational cohort of volunteers with ancestry from the Northern Isles of Scotland, primarily for identifying genetic variants influencing disease. The new online protocol is separate to, but follows on from, earlier genetic epidemiological clinic-based studies in the isolated populations of Orkney and Shetland. These populations are favourable for the study of rarer genetic variants due to genetic drift, the large number of relatives, and availability of pedigree information. They are known to be genetically distinct from mainland British populations.

Methods and analysis: Online methods are being used to recruit ~4,000 people who have Northern Isles ancestry, living anywhere in the world. The option for participants to have actionable genetic results returned is offered. Consent will be taken electronically. Data will be collected at baseline through an online questionnaire and longitudinally through linkage to NHS data in the electronic health record. The questionnaire collects a variety of phenotypes including personal and family health. DNA will be extracted from saliva samples then genome-wide genotyped and exome sequenced. VIKING II aims to capitalise on the special features of the Northern Isles populations to create a research cohort that will facilitate the analysis of genetic variants associated with a broad range of traits and disease endpoints, including otherwise rare variants that have drifted to high frequency in these populations.

Ethics and dissemination: The South East Scotland Research Ethics Committee gave the study a favourable opinion. VIKING II is sponsored by the University of Edinburgh and NHS Lothian. Summary research findings will be disseminated to participants and funding bodies, presented at conferences and reported in peer-reviewed publications.

Article summary: Strengths and limitations of this studyDetailed data and biological sample collection of research volunteers with unique ancestry.Consent for access to routinely collected clinical EHR data and for future re-contact, providing a longitudinal component.Optional consent for return of actionable genetic results.~4,000 participants is a relatively small number for certain types of genetic analyses, so the cohort is underpowered on its own, in some study designs.Resources to maintain the cohort, and to store data and DNA samples, are significant, with sustainability dependent on infrastructure support and funding.

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