Loick P Kojom Foko, Jahnvi Jakhan, Geetika Narang, Vineeta Singh
{"title":"恶性疟原虫富含组氨酸蛋白2/3的全球多态性及其对疟疾快速诊断测试检测的影响:一项系统综述和荟萃分析。","authors":"Loick P Kojom Foko, Jahnvi Jakhan, Geetika Narang, Vineeta Singh","doi":"10.1080/14737159.2023.2255136","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>This review presents an overview of field findings on sequence variation of <i>Plasmodium falciparum</i> histidine-rich proteins 2/3 (<i>Pf</i>HRP2/3) for which reference types (1-24) have been identified, and its critical impact on <i>Pf</i>HRP2-based rapid diagnostic test (RDT) detection.</p><p><strong>Research design and methods: </strong>This systematic review and meta-analysis was registered with PROSPERO, CRD42022316027, and conducted as per the PRISMA guidelines, and the methodological quality of studies was assessed.</p><p><strong>Results: </strong>Of the 2184 records identified, 34 studies were included mostly from Africa (47.1%) and Asia (35.3%). The reference <i>Pf</i>HRP2 types 1, 2, 3, 6, and 7 are invariably found at proportions ≥ 80-100% in all areas with the exception of The Americas where their proportion is very low. The proteins exhibited high diversity of variants/unknown types, especially for types 1, 2, 4, and 7. Eleven major <i>Pf</i>HRP2 epitopes were found at pooled proportion > 90%. The existing models to predict RDT detection are greatly limited by the impact of factors such as low (very low) parasitemia, RDT brand, and <i>Pf</i>HRP3 cross-reactivity. <i>Pf</i>HRP2 length and presence/number of a given reference repeat type/variant did not seem to impact RDT detection.</p><p><strong>Conclusions: </strong><i>Pf</i>HRP2/3 are highly polymorphic and current findings are insufficient, conflicting and not convincing enough to conclude on the role of <i>Pf</i>HRP2/3 sequence polymorphism in <i>Pf</i>HRP2-based RDT detection.</p>","PeriodicalId":12113,"journal":{"name":"Expert Review of Molecular Diagnostics","volume":" ","pages":"925-943"},"PeriodicalIF":3.9000,"publicationDate":"2023-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Global polymorphism of <i>Plasmodium falciparum</i> histidine rich proteins 2/3 and impact on malaria rapid diagnostic test detection: a systematic review and meta-analysis.\",\"authors\":\"Loick P Kojom Foko, Jahnvi Jakhan, Geetika Narang, Vineeta Singh\",\"doi\":\"10.1080/14737159.2023.2255136\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>This review presents an overview of field findings on sequence variation of <i>Plasmodium falciparum</i> histidine-rich proteins 2/3 (<i>Pf</i>HRP2/3) for which reference types (1-24) have been identified, and its critical impact on <i>Pf</i>HRP2-based rapid diagnostic test (RDT) detection.</p><p><strong>Research design and methods: </strong>This systematic review and meta-analysis was registered with PROSPERO, CRD42022316027, and conducted as per the PRISMA guidelines, and the methodological quality of studies was assessed.</p><p><strong>Results: </strong>Of the 2184 records identified, 34 studies were included mostly from Africa (47.1%) and Asia (35.3%). The reference <i>Pf</i>HRP2 types 1, 2, 3, 6, and 7 are invariably found at proportions ≥ 80-100% in all areas with the exception of The Americas where their proportion is very low. The proteins exhibited high diversity of variants/unknown types, especially for types 1, 2, 4, and 7. Eleven major <i>Pf</i>HRP2 epitopes were found at pooled proportion > 90%. The existing models to predict RDT detection are greatly limited by the impact of factors such as low (very low) parasitemia, RDT brand, and <i>Pf</i>HRP3 cross-reactivity. <i>Pf</i>HRP2 length and presence/number of a given reference repeat type/variant did not seem to impact RDT detection.</p><p><strong>Conclusions: </strong><i>Pf</i>HRP2/3 are highly polymorphic and current findings are insufficient, conflicting and not convincing enough to conclude on the role of <i>Pf</i>HRP2/3 sequence polymorphism in <i>Pf</i>HRP2-based RDT detection.</p>\",\"PeriodicalId\":12113,\"journal\":{\"name\":\"Expert Review of Molecular Diagnostics\",\"volume\":\" \",\"pages\":\"925-943\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2023-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Expert Review of Molecular Diagnostics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1080/14737159.2023.2255136\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2023/9/12 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"PATHOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Expert Review of Molecular Diagnostics","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1080/14737159.2023.2255136","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/9/12 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"PATHOLOGY","Score":null,"Total":0}
Global polymorphism of Plasmodium falciparum histidine rich proteins 2/3 and impact on malaria rapid diagnostic test detection: a systematic review and meta-analysis.
Background: This review presents an overview of field findings on sequence variation of Plasmodium falciparum histidine-rich proteins 2/3 (PfHRP2/3) for which reference types (1-24) have been identified, and its critical impact on PfHRP2-based rapid diagnostic test (RDT) detection.
Research design and methods: This systematic review and meta-analysis was registered with PROSPERO, CRD42022316027, and conducted as per the PRISMA guidelines, and the methodological quality of studies was assessed.
Results: Of the 2184 records identified, 34 studies were included mostly from Africa (47.1%) and Asia (35.3%). The reference PfHRP2 types 1, 2, 3, 6, and 7 are invariably found at proportions ≥ 80-100% in all areas with the exception of The Americas where their proportion is very low. The proteins exhibited high diversity of variants/unknown types, especially for types 1, 2, 4, and 7. Eleven major PfHRP2 epitopes were found at pooled proportion > 90%. The existing models to predict RDT detection are greatly limited by the impact of factors such as low (very low) parasitemia, RDT brand, and PfHRP3 cross-reactivity. PfHRP2 length and presence/number of a given reference repeat type/variant did not seem to impact RDT detection.
Conclusions: PfHRP2/3 are highly polymorphic and current findings are insufficient, conflicting and not convincing enough to conclude on the role of PfHRP2/3 sequence polymorphism in PfHRP2-based RDT detection.
期刊介绍:
Expert Review of Molecular Diagnostics (ISSN 1473-7159) publishes expert reviews of the latest advancements in the field of molecular diagnostics including the detection and monitoring of the molecular causes of disease that are being translated into groundbreaking diagnostic and prognostic technologies to be used in the clinical diagnostic setting.
Each issue of Expert Review of Molecular Diagnostics contains leading reviews on current and emerging topics relating to molecular diagnostics, subject to a rigorous peer review process; editorials discussing contentious issues in the field; diagnostic profiles featuring independent, expert evaluations of diagnostic tests; meeting reports of recent molecular diagnostics conferences and key paper evaluations featuring assessments of significant, recently published articles from specialists in molecular diagnostic therapy.
Expert Review of Molecular Diagnostics provides the forum for reporting the critical advances being made in this ever-expanding field, as well as the major challenges ahead in their clinical implementation. The journal delivers this information in concise, at-a-glance article formats: invaluable to a time-constrained community.