TREM2是皮肤黑色素瘤微环境患者预后的潜在免疫相关生物标志物

4区 医学 Q3 Medicine Disease Markers Pub Date : 2023-01-27 eCollection Date: 2023-01-01 DOI:10.1155/2023/8101837
Xinlin Zhu, Zhaoxiang Zeng, Min Chen, Xianzhen Chen, Dongying Hu, Weiwei Jiang, Mingwei Du, Tianyang Chen, Tiancheng Chen, Wanqing Liao, Chao Zhang, Ying Qu, Weihua Pan
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The relationship between TREM2 expression and diagnostic and prognostic value of SKCM patients via using The Cancer Genome Atlas (TCGA) data. The expression level of TREM2 and clinical characteristic correlation in SKCM patients were assessed by the Wilcoxon rank sum test. The cox regression methods, Kaplan-Meier (KM), and log-rank test were used to assess the impact of TREM2 expression on the overall survival (OS). Furthermore, the Gene Set Enrichment Analysis (GSEA) and TIMER were performed to evaluate the enrichment pathways and potential functions and quantify the immune cell infiltration level for TREM2 expression. Results The TREM2 in SKCM sample expression levels was significantly higher than in normal tissues. Moreover, this expression level of TREM2 was also associated with the BMI of SKCM patients. KM overall survival analysis and OS curve displayed that a high-level TREM2 expression was significantly correlated with a better SKCM prognosis of patients as compared with a low level of TREM2 expression. The GSEA analysis also revealed that TREM2 was associated with immune functions, such as neutrophil activation. 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摘要

背景:皮肤黑色素瘤(SKCM)是一种由遗传和环境因素诱发的破坏性皮肤癌,近年来其发病率迅速上升。肿瘤微环境的免疫浸润与许多肿瘤的总生存率呈正相关。髓系细胞上表达的触发受体 2(TREM2)是免疫球蛋白超家族的一种跨膜受体,也是介导免疫的多种病理通路的重要信号枢纽。尽管有大量证据表明 TREM2 在某些肿瘤的发生中起着关键作用,但目前还没有对 TREM2 进行系统的 SKCM 分析。我们的目标是利用《癌症基因组图谱》(TCGA)数据分析了 TREM2 表达与 SKCM 患者诊断和预后价值之间的关系。用Wilcoxon秩和检验评估TREM2在SKCM患者中的表达水平和临床特征的相关性。采用cox回归法、Kaplan-Meier(KM)和对数秩检验来评估TREM2表达对总生存期(OS)的影响。此外,还进行了基因组富集分析(Gene Set Enrichment Analysis,GSEA)和TIMER,以评估TREM2表达的富集途径和潜在功能,并量化免疫细胞浸润水平:结果:TREM2在SKCM样本中的表达水平明显高于正常组织。此外,TREM2的表达水平还与SKCM患者的体重指数有关。KM总生存分析和OS曲线显示,TREM2表达水平高与TREM2表达水平低相比,与SKCM患者较好的预后明显相关。GSEA分析还显示,TREM2与中性粒细胞活化等免疫功能相关:结论:TREM2在SKCM中起着至关重要的作用,可能是一种预后生物标志物,并与SKCM患者的免疫浸润相关。
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TREM2 as a Potential Immune-Related Biomarker of Prognosis in Patients with Skin Cutaneous Melanoma Microenvironment.
Background The skin cutaneous melanoma (SKCM) is a devastating form of skin cancer triggered by genetic and environmental factors, and the incidence of SKCM has rapidly increased in recent years. Immune infiltration of the tumor microenvironment is positively associated with overall survival in many tumors. Triggering receptor expressed on myeloid cells 2 (TREM2) is a transmembrane receptor of the immunoglobulin superfamily and a crucial signaling hub for multiple pathological pathways that mediate immunity. Although numerous evidences suggest a crucial role for TREM2 in tumorigenesis of some tumors, no systematic SKCM analysis of TREM2 is available. Mehods. The relationship between TREM2 expression and diagnostic and prognostic value of SKCM patients via using The Cancer Genome Atlas (TCGA) data. The expression level of TREM2 and clinical characteristic correlation in SKCM patients were assessed by the Wilcoxon rank sum test. The cox regression methods, Kaplan-Meier (KM), and log-rank test were used to assess the impact of TREM2 expression on the overall survival (OS). Furthermore, the Gene Set Enrichment Analysis (GSEA) and TIMER were performed to evaluate the enrichment pathways and potential functions and quantify the immune cell infiltration level for TREM2 expression. Results The TREM2 in SKCM sample expression levels was significantly higher than in normal tissues. Moreover, this expression level of TREM2 was also associated with the BMI of SKCM patients. KM overall survival analysis and OS curve displayed that a high-level TREM2 expression was significantly correlated with a better SKCM prognosis of patients as compared with a low level of TREM2 expression. The GSEA analysis also revealed that TREM2 was associated with immune functions, such as neutrophil activation. Conclusion TREM2 played a crucial role in SKCM, which might be a prognostic biomarker and correlated with immune infifiltrates in SKCM patients.
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来源期刊
Disease Markers
Disease Markers 医学-病理学
自引率
0.00%
发文量
792
审稿时长
6-12 weeks
期刊介绍: Disease Markers is a peer-reviewed, Open Access journal that publishes original research articles, review articles, and clinical studies related to the identification of disease markers, the elucidation of their role and mechanism, as well as their application in the prognosis, diagnosis and treatment of diseases.
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