Robin S Sidhu, Erik C Johnson, Douglas L Jones, Rama Ratnam
{"title":"具有相关噪声的动态尖峰阈值可预测神经元尖峰序列中观察到的负间隔相关模式。","authors":"Robin S Sidhu, Erik C Johnson, Douglas L Jones, Rama Ratnam","doi":"10.1007/s00422-022-00946-5","DOIUrl":null,"url":null,"abstract":"<p><p>Negative correlations in the sequential evolution of interspike intervals (ISIs) are a signature of memory in neuronal spike-trains. They provide coding benefits including firing-rate stabilization, improved detectability of weak sensory signals, and enhanced transmission of information by improving signal-to-noise ratio. Primary electrosensory afferent spike-trains in weakly electric fish fall into two categories based on the pattern of ISI correlations: non-bursting units have negative correlations which remain negative but decay to zero with increasing lags (Type I ISI correlations), and bursting units have oscillatory (alternating sign) correlation which damp to zero with increasing lags (Type II ISI correlations). Here, we predict and match observed ISI correlations in these afferents using a stochastic dynamic threshold model. We determine the ISI correlation function as a function of an arbitrary discrete noise correlation function [Formula: see text], where k is a multiple of the mean ISI. The function permits forward and inverse calculations of the correlation function. Both types of correlation functions can be generated by adding colored noise to the spike threshold with Type I correlations generated with slow noise and Type II correlations generated with fast noise. A first-order autoregressive (AR) process with a single parameter is sufficient to predict and accurately match both types of afferent ISI correlation functions, with the type being determined by the sign of the AR parameter. The predicted and experimentally observed correlations are in geometric progression. The theory predicts that the limiting sum of ISI correlations is [Formula: see text] yielding a perfect DC-block in the power spectrum of the spike train. Observed ISI correlations from afferents have a limiting sum that is slightly larger at [Formula: see text] ([Formula: see text]). We conclude that the underlying process for generating ISIs may be a simple combination of low-order AR and moving average processes and discuss the results from the perspective of optimal coding.</p>","PeriodicalId":55374,"journal":{"name":"Biological Cybernetics","volume":null,"pages":null},"PeriodicalIF":1.7000,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9691502/pdf/","citationCount":"0","resultStr":"{\"title\":\"A dynamic spike threshold with correlated noise predicts observed patterns of negative interval correlations in neuronal spike trains.\",\"authors\":\"Robin S Sidhu, Erik C Johnson, Douglas L Jones, Rama Ratnam\",\"doi\":\"10.1007/s00422-022-00946-5\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Negative correlations in the sequential evolution of interspike intervals (ISIs) are a signature of memory in neuronal spike-trains. They provide coding benefits including firing-rate stabilization, improved detectability of weak sensory signals, and enhanced transmission of information by improving signal-to-noise ratio. Primary electrosensory afferent spike-trains in weakly electric fish fall into two categories based on the pattern of ISI correlations: non-bursting units have negative correlations which remain negative but decay to zero with increasing lags (Type I ISI correlations), and bursting units have oscillatory (alternating sign) correlation which damp to zero with increasing lags (Type II ISI correlations). Here, we predict and match observed ISI correlations in these afferents using a stochastic dynamic threshold model. We determine the ISI correlation function as a function of an arbitrary discrete noise correlation function [Formula: see text], where k is a multiple of the mean ISI. The function permits forward and inverse calculations of the correlation function. Both types of correlation functions can be generated by adding colored noise to the spike threshold with Type I correlations generated with slow noise and Type II correlations generated with fast noise. A first-order autoregressive (AR) process with a single parameter is sufficient to predict and accurately match both types of afferent ISI correlation functions, with the type being determined by the sign of the AR parameter. The predicted and experimentally observed correlations are in geometric progression. The theory predicts that the limiting sum of ISI correlations is [Formula: see text] yielding a perfect DC-block in the power spectrum of the spike train. Observed ISI correlations from afferents have a limiting sum that is slightly larger at [Formula: see text] ([Formula: see text]). We conclude that the underlying process for generating ISIs may be a simple combination of low-order AR and moving average processes and discuss the results from the perspective of optimal coding.</p>\",\"PeriodicalId\":55374,\"journal\":{\"name\":\"Biological Cybernetics\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.7000,\"publicationDate\":\"2022-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9691502/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biological Cybernetics\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1007/s00422-022-00946-5\",\"RegionNum\":4,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2022/10/16 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"COMPUTER SCIENCE, CYBERNETICS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biological Cybernetics","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1007/s00422-022-00946-5","RegionNum":4,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/10/16 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"COMPUTER SCIENCE, CYBERNETICS","Score":null,"Total":0}
引用次数: 0
摘要
尖峰间期(ISIs)序列演变中的负相关是神经元尖峰序列记忆的一个特征。它们提供了编码方面的好处,包括稳定点燃率、提高微弱感觉信号的可探测性,以及通过提高信噪比来增强信息传输。弱电鱼类的初级电感觉传入尖峰序列根据 ISI 相关性模式可分为两类:非爆发单元具有负相关性,这种相关性保持为负,但随着滞后期的增加衰减为零(I 类 ISI 相关性);爆发单元具有振荡(符号交替)相关性,这种相关性随着滞后期的增加衰减为零(II 类 ISI 相关性)。在这里,我们使用随机动态阈值模型预测并匹配观察到的这些传入中的 ISI 相关性。我们将 ISI 相关函数确定为任意离散噪声相关函数的函数[公式:见正文],其中 k 是平均 ISI 的倍数。该函数允许对相关函数进行正向和反向计算。这两种类型的相关函数都可以通过在尖峰阈值上添加彩色噪声来生成,其中第一类相关函数由慢速噪声生成,第二类相关函数由快速噪声生成。具有单一参数的一阶自回归(AR)过程足以预测并准确匹配两种类型的传入 ISI 相关函数,其类型由 AR 参数的符号决定。预测的相关性和实验观察到的相关性呈几何级数增长。理论预测 ISI 相关性的极限和为[公式:见正文],从而在尖峰序列的功率谱中产生一个完美的直流区块。观察到的来自传入的 ISI 相关性的极限和略大于[公式:见正文]([公式:见正文])。我们的结论是,产生 ISI 的基本过程可能是低阶 AR 和移动平均过程的简单组合,并从优化编码的角度对结果进行了讨论。
A dynamic spike threshold with correlated noise predicts observed patterns of negative interval correlations in neuronal spike trains.
Negative correlations in the sequential evolution of interspike intervals (ISIs) are a signature of memory in neuronal spike-trains. They provide coding benefits including firing-rate stabilization, improved detectability of weak sensory signals, and enhanced transmission of information by improving signal-to-noise ratio. Primary electrosensory afferent spike-trains in weakly electric fish fall into two categories based on the pattern of ISI correlations: non-bursting units have negative correlations which remain negative but decay to zero with increasing lags (Type I ISI correlations), and bursting units have oscillatory (alternating sign) correlation which damp to zero with increasing lags (Type II ISI correlations). Here, we predict and match observed ISI correlations in these afferents using a stochastic dynamic threshold model. We determine the ISI correlation function as a function of an arbitrary discrete noise correlation function [Formula: see text], where k is a multiple of the mean ISI. The function permits forward and inverse calculations of the correlation function. Both types of correlation functions can be generated by adding colored noise to the spike threshold with Type I correlations generated with slow noise and Type II correlations generated with fast noise. A first-order autoregressive (AR) process with a single parameter is sufficient to predict and accurately match both types of afferent ISI correlation functions, with the type being determined by the sign of the AR parameter. The predicted and experimentally observed correlations are in geometric progression. The theory predicts that the limiting sum of ISI correlations is [Formula: see text] yielding a perfect DC-block in the power spectrum of the spike train. Observed ISI correlations from afferents have a limiting sum that is slightly larger at [Formula: see text] ([Formula: see text]). We conclude that the underlying process for generating ISIs may be a simple combination of low-order AR and moving average processes and discuss the results from the perspective of optimal coding.
期刊介绍:
Biological Cybernetics is an interdisciplinary medium for theoretical and application-oriented aspects of information processing in organisms, including sensory, motor, cognitive, and ecological phenomena. Topics covered include: mathematical modeling of biological systems; computational, theoretical or engineering studies with relevance for understanding biological information processing; and artificial implementation of biological information processing and self-organizing principles. Under the main aspects of performance and function of systems, emphasis is laid on communication between life sciences and technical/theoretical disciplines.