Aaron D Trowbridge, Ciaran P Seath, Frances P Rodriguez-Rivera, Beryl X Li, Barbara E Dul, Adam G Schwaid, Benito F Buksh, Jacob B Geri, James V Oakley, Olugbeminiyi O Fadeyi, Rob C Oslund, Keun Ah Ryu, Cory White, Tamara Reyes-Robles, Paul Tawa, Dann L Parker, David W C MacMillan
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引用次数: 0
摘要
由于缺乏靶点验证,一半以上的新治疗方法在临床试验中失败。因此,开发新的方法来改进和加速细胞靶点的鉴定(即广义上的靶点 ID)仍然是药物发现的一个基本目标。虽然近几十年来测序和质谱技术的进步彻底改变了药物靶点的识别,但相应的基于化学的方法 50 多年来一直没有改变。由于受体占有率有限和交联产率低导致信噪比差,特别是在靶向低丰度膜蛋白或多个蛋白靶点时,现代靶点识别工作经常受到过时的化学活化模式的困扰。在这里,我们描述了一种广泛通用的光催化小分子靶标 ID 平台,它建立在通过可见光介导的德克斯特能量转移持续产生高能碳烯中间体,从而催化放大靶标交联的基础上。通过将反应性弹头标签与小分子配体解耦,催化信号放大产生了前所未有的靶标富集水平,实现了多种药物的定量靶标和非靶标识别,包括 (+)-JQ1、紫杉醇(Taxol)、达沙替尼(Sprycel)以及两种 G 蛋白偶联受体--ADORA2A 和 GPR40。
Small molecule photocatalysis enables drug target identification via energy transfer.
Over half of new therapeutic approaches fail in clinical trials due to a lack of target validation. As such, the development of new methods to improve and accelerate the identification of cellular targets, broadly known as target ID, remains a fundamental goal in drug discovery. While advances in sequencing and mass spectrometry technologies have revolutionized drug target ID in recent decades, the corresponding chemical-based approaches have not changed in over 50 y. Consigned to outdated stoichiometric activation modes, modern target ID campaigns are regularly confounded by poor signal-to-noise resulting from limited receptor occupancy and low crosslinking yields, especially when targeting low abundance membrane proteins or multiple protein target engagement. Here, we describe a broadly general platform for photocatalytic small molecule target ID, which is founded upon the catalytic amplification of target-tag crosslinking through the continuous generation of high-energy carbene intermediates via visible light-mediated Dexter energy transfer. By decoupling the reactive warhead tag from the small molecule ligand, catalytic signal amplification results in unprecedented levels of target enrichment, enabling the quantitative target and off target ID of several drugs including (+)-JQ1, paclitaxel (Taxol), dasatinib (Sprycel), as well as two G-protein-coupled receptors-ADORA2A and GPR40.
期刊介绍:
The Proceedings of the National Academy of Sciences (PNAS), a peer-reviewed journal of the National Academy of Sciences (NAS), serves as an authoritative source for high-impact, original research across the biological, physical, and social sciences. With a global scope, the journal welcomes submissions from researchers worldwide, making it an inclusive platform for advancing scientific knowledge.