通过蛋白质工程学方法增强单-ADP-核糖转移酶的活性检测。

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Protein Engineering Design & Selection Pub Date : 2022-02-17 DOI:10.1093/protein/gzac006
Albert Galera-Prat, Juho Alaviuhkola, Heli I Alanen, Lari Lehtiö
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引用次数: 0

摘要

人类单ADP-核糖基化PARP酶与多种临床相关过程有关,其中许多PARP被认为是潜在的药物靶点。尽管该领域最近取得了进展,但由于缺乏快速筛选高效力化合物和分析它们对不同酶的作用的工具,发现抑制剂的努力一直受到阻碍。我们设计了单ART催化片段,将其整合到基于纤维素酶的八价支架中。与游离酶相比,由于溶解性、稳定性和催化结构域的接近,基于支架的系统提高了受测 PARPs 的活性,其中 PARP12 的活性提高了 10 倍以上。这样,我们就可以使用均相 NAD+ 转换测定法来测量它们的活性,从而实现自动化,降低测定量和成本。由于检测灵敏度的提高,这种方法将有助于发现更有效的化合物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Protein engineering approach to enhance activity assays of mono-ADP-ribosyltransferases through proximity.

Human mono-ADP-ribosylating PARP enzymes have been linked to several clinically relevant processes and many of these PARPs have been suggested as potential drug targets. Despite recent advances in the field, efforts to discover inhibitors have been hindered by the lack of tools to rapidly screen for high potency compounds and profile them against the different enzymes. We engineered mono-ART catalytic fragments to be incorporated into a cellulosome-based octavalent scaffold. Compared to the free enzymes, the scaffold-based system results in an improved activity for the tested PARPs due to improved solubility, stability and the proximity of the catalytic domains, altogether boosting their activity beyond 10-fold in the case of PARP12. This allows us to measure their activity using a homogeneous NAD+ conversion assay, facilitating its automation to lower the assay volume and costs. The approach will enable the discovery of more potent compounds due to increased assay sensitivity.

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来源期刊
Protein Engineering Design & Selection
Protein Engineering Design & Selection 生物-生化与分子生物学
CiteScore
3.30
自引率
4.20%
发文量
14
审稿时长
6-12 weeks
期刊介绍: Protein Engineering, Design and Selection (PEDS) publishes high-quality research papers and review articles relevant to the engineering, design and selection of proteins for use in biotechnology and therapy, and for understanding the fundamental link between protein sequence, structure, dynamics, function, and evolution.
期刊最新文献
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