星座:基因组处理的安全自优化框架

V. Bumgardner, V. Marek, Caylin D. Hickey, K. Nandakumar
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引用次数: 4

摘要

星座框架是为基因组处理的过程自动化、安全工作负载分配和性能优化而设计的。Constellation的目标是通过基于代理的基因组处理容器管理,为处理定制的“一次写入,随处运行”的基因组管道提供一个灵活的平台,跨越一系列计算资源和环境。目前,肯塔基大学医学中心(University of Kentucky Medical Center)正在使用Constellation框架的一个实施方案,用于临床诊断和基因组处理研究。
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Constellation: A secure self-optimizing framework for genomic processing
The Constellation framework is designed for process automation, secure workload distribution, and performance optimization for genomic processing. The goal of Constellation is to provide a flexible platform for the processing of custom ”write once run anywhere” genomic pipelines, across a range of computational resources and environments, through the agent-based management of genomic processing containers. An implementation of the Constellation framework is currently in use at the University of Kentucky Medical Center for clinical diagnostic and research genomic processing.
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