N. Iwamoto, T. Shimada, T. Moudgil, Ryan Meng, Tanisha Christie, Alexander C. Dowell, R. Leidner, B. Bell, William L. Redmond, E. Tran, Hong-Ming Hu, T. Hilton, B. Piening, Y. Koguchi, B. Fox
{"title":"113揭示头颈部鳞状细胞癌(HNSCC)的暗免疫肽:与通用癌症疫苗、免疫监测和TIL治疗的相关性","authors":"N. Iwamoto, T. Shimada, T. Moudgil, Ryan Meng, Tanisha Christie, Alexander C. Dowell, R. Leidner, B. Bell, William L. Redmond, E. Tran, Hong-Ming Hu, T. Hilton, B. Piening, Y. Koguchi, B. Fox","doi":"10.1136/jitc-2022-sitc2022.0113","DOIUrl":null,"url":null,"abstract":"Background Discoveries of the last two years have initiated a renaissance in our understanding of the targets T cells recog-nize on cancer cells. Identification of HLA-presented non-can-onical or cryptic peptides that are non-mutated and have high interpatient sharing in AML [PMID: 33740418], coupled with their absence from the thymus, led them to be designated as alternative neoantigens with potential for being universal cancer vaccines [PMID: 33852826]. These cryptic genes, in some cases, appear to play a role in promoting malignancy, further strengthening the rationale for their identification and use as targets for immunotherapy. Our group seeks to identify the Dark Immunopeptidome of HNSCC. Over the last several months we have swithed from exome-capture RNA-Seq, which fails to detect non-canonical gene sequences, to ribo-Seq, which can capture these cryptic transcripts.","PeriodicalId":398566,"journal":{"name":"Regular and Young Investigator Award Abstracts","volume":"137 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"113 Uncovering the dark immunopeptidome of head and neck squamous cell carcinoma (HNSCC): relevance for universal cancer vaccines, immunological monitoring and TIL therapy\",\"authors\":\"N. Iwamoto, T. Shimada, T. Moudgil, Ryan Meng, Tanisha Christie, Alexander C. Dowell, R. Leidner, B. Bell, William L. Redmond, E. Tran, Hong-Ming Hu, T. Hilton, B. Piening, Y. Koguchi, B. Fox\",\"doi\":\"10.1136/jitc-2022-sitc2022.0113\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Background Discoveries of the last two years have initiated a renaissance in our understanding of the targets T cells recog-nize on cancer cells. Identification of HLA-presented non-can-onical or cryptic peptides that are non-mutated and have high interpatient sharing in AML [PMID: 33740418], coupled with their absence from the thymus, led them to be designated as alternative neoantigens with potential for being universal cancer vaccines [PMID: 33852826]. These cryptic genes, in some cases, appear to play a role in promoting malignancy, further strengthening the rationale for their identification and use as targets for immunotherapy. Our group seeks to identify the Dark Immunopeptidome of HNSCC. Over the last several months we have swithed from exome-capture RNA-Seq, which fails to detect non-canonical gene sequences, to ribo-Seq, which can capture these cryptic transcripts.\",\"PeriodicalId\":398566,\"journal\":{\"name\":\"Regular and Young Investigator Award Abstracts\",\"volume\":\"137 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Regular and Young Investigator Award Abstracts\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1136/jitc-2022-sitc2022.0113\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Regular and Young Investigator Award Abstracts","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1136/jitc-2022-sitc2022.0113","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
113 Uncovering the dark immunopeptidome of head and neck squamous cell carcinoma (HNSCC): relevance for universal cancer vaccines, immunological monitoring and TIL therapy
Background Discoveries of the last two years have initiated a renaissance in our understanding of the targets T cells recog-nize on cancer cells. Identification of HLA-presented non-can-onical or cryptic peptides that are non-mutated and have high interpatient sharing in AML [PMID: 33740418], coupled with their absence from the thymus, led them to be designated as alternative neoantigens with potential for being universal cancer vaccines [PMID: 33852826]. These cryptic genes, in some cases, appear to play a role in promoting malignancy, further strengthening the rationale for their identification and use as targets for immunotherapy. Our group seeks to identify the Dark Immunopeptidome of HNSCC. Over the last several months we have swithed from exome-capture RNA-Seq, which fails to detect non-canonical gene sequences, to ribo-Seq, which can capture these cryptic transcripts.