113揭示头颈部鳞状细胞癌(HNSCC)的暗免疫肽:与通用癌症疫苗、免疫监测和TIL治疗的相关性

N. Iwamoto, T. Shimada, T. Moudgil, Ryan Meng, Tanisha Christie, Alexander C. Dowell, R. Leidner, B. Bell, William L. Redmond, E. Tran, Hong-Ming Hu, T. Hilton, B. Piening, Y. Koguchi, B. Fox
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引用次数: 1

摘要

过去两年的发现使我们对T细胞识别癌细胞的目标的理解有了新的认识。hla呈现的非典型或隐型肽的鉴定是非突变的,在AML中具有高度的患者共享性[PMID: 33740418],加上它们不存在于胸腺中,使它们被指定为替代的新抗原,有可能成为通用的癌症疫苗[PMID: 33852826]。在某些情况下,这些隐基因似乎在促进恶性肿瘤中发挥作用,进一步加强了它们的识别和用作免疫治疗靶点的理由。本小组试图鉴定HNSCC的暗免疫肽。在过去的几个月里,我们已经从外显子组捕获RNA-Seq(无法检测非典型基因序列)转向了核糖- seq(可以捕获这些隐式转录本)。
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113 Uncovering the dark immunopeptidome of head and neck squamous cell carcinoma (HNSCC): relevance for universal cancer vaccines, immunological monitoring and TIL therapy
Background Discoveries of the last two years have initiated a renaissance in our understanding of the targets T cells recog-nize on cancer cells. Identification of HLA-presented non-can-onical or cryptic peptides that are non-mutated and have high interpatient sharing in AML [PMID: 33740418], coupled with their absence from the thymus, led them to be designated as alternative neoantigens with potential for being universal cancer vaccines [PMID: 33852826]. These cryptic genes, in some cases, appear to play a role in promoting malignancy, further strengthening the rationale for their identification and use as targets for immunotherapy. Our group seeks to identify the Dark Immunopeptidome of HNSCC. Over the last several months we have swithed from exome-capture RNA-Seq, which fails to detect non-canonical gene sequences, to ribo-Seq, which can capture these cryptic transcripts.
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