利用与结直肠癌相关的大量遗传和环境数据,建立可靠的结直肠癌(CRC)风险预测模型

Chunqiu Zheng, Lei Xing, Tian Li, Tingting Li, Huan Yang, Jia Cao, Badong Chen, Ziyuan Zhou, Le Zhang
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引用次数: 1

摘要

目前,结直肠癌(CRC)已经成为世界范围内最常见的癌症之一。虽然由于新的先进治疗方法和医学水平的提高,结直肠癌患者的预后得到了显著改善,但结直肠癌患者的5年生存率仍然很低。因此,我们推测CRC可能是由遗传和环境因素共同作用的复杂原因引起的。因此,本研究收集了CRC患者和无癌对照的CRC遗传变异和环境暴露信息的大数据,用于CRC预测模型的训练和测试。研究结果表明:(1)人工评审的实验证据证实了所探索的遗传和环境生物标志物是导致结直肠癌的原因;(2)利用结直肠癌相关大数据进行参数优化后,该模型可以有效预测结直肠癌的风险;(3)我们创新的广义核递归最大相关熵(GKRMC)算法具有较高的预测能力。最后,我们讨论了GKRMC优于经典回归算法的原因以及相关的未来研究。
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Developing a robust colorectal cancer (CRC) risk predictive model with the big genetic and environment related CRC data
Currently, colorectal cancer (CRC) already becomes one of the most common cancers worldwide. Though the prognosis of CRC patients is dramatically improved due to the new advanced treatments and medical improvements, the 5-year survival rate for the CRC patient is still low. Thus, we hypothesize that CRC may result from the complicated reasons related to both genetic and environmental factors. For this reason, this study collects such big CRC data with information of genetic variations and environmental exposure for the CRC patients and cancer-free controls that are employed to train and test the predictive CRC model. Our results demonstrate that (1) the explored genetic and environmental biomarkers are validated to cause the CRC by the manually reviewed experimental evidences, (2) the model can efficiently predict the risk of CRC after parameter optimization by the big CRC-related data, (3) our innovated generalized kernel recursive maximum correntropy(GKRMC) algorithm has high predictive power. Finally, we discuss why the GKRMC can outperform the classical regression algorithms and the related future study.
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