引脚受限多功能数字微流控生物芯片的广播电极寻址

Tao Xu, K. Chakrabarty
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引用次数: 137

摘要

数字微流体的最新进展使芯片上的实验室设备能够用于DNA测序、免疫测定、临床化学和蛋白质结晶。可以使用二维电极阵列和纳升体积的液体进行基本操作,如液滴分配、混合、稀释、局部加热和孵育。在这种微流体“生物芯片”中,用于控制电极的独立输入引脚的数量是一个重要的成本驱动因素,特别是对于正在开发用于临床和即时诊断的一次性PCB设备。然而,大多数先前的生物芯片设计自动化工作都假设使用大量输入引脚对电极进行独立控制。先前工作的另一个限制是控制针到电极的映射仅适用于特定的生物测定。提出了一种基于广播寻址的引脚受限多功能生物芯片设计技术。所提出的方法为生物测定提供了高通量,并通过识别和连接具有“兼容”驱动序列的控制引脚来减少控制引脚的数量。所提出的方法使用多功能芯片进行评估,该芯片设计用于执行一组多重生物测定,聚合酶链反应和蛋白质稀释测定。
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Broadcast electrode-addressing for pin-constrained multi-functional digital microfluidic biochips
Recent advances in digital microfluidics have enabled lab-on-a-chip devices for DNA sequencing, immunoassays, clinical chemistry, and protein crystallization. Basic operations such as droplet dispensing, mixing, dilution, localized heating, and incubation can be carried out using a two-dimensional array of electrodes and nanoliter volumes of liquid. The number of independent input pins used to control the electrodes in such microfluidic "biochips" is an important cost-driver, especially for disposable PCB devices that are being developed for clinical and point-of-care diagnostics. However, most prior work on biochip design-automation has assumed independent control of the electrodes using a large number of input pins. Another limitation of prior work is that the mapping of control pins to electrodes is only applicable for a specific bioassay. We present a broadcast-addressing-based design technique for pin-constrained multi-functional biochips. The proposed method provides high throughput for bioassays and it reduces the number of control pins by identifying and connecting control pins with "compatible" actuation sequences. The proposed method is evaluated using a multifunctional chip designed to execute a set of multiplexed bioassays, the polymerase chain reaction, and a protein dilution assay.
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