Daniel Firnkorn, M. Gietzelt, C. Karmen, Matthias Ganzinger, P. Knaup-Gregori
{"title":"通用病例提取器:从i2b2扩展的临床事实输出","authors":"Daniel Firnkorn, M. Gietzelt, C. Karmen, Matthias Ganzinger, P. Knaup-Gregori","doi":"10.3233/978-1-61499-512-8-937","DOIUrl":null,"url":null,"abstract":"Data import and export tools of the biomedical data warehouse system i2b2 (https://www.i2b2.org/) are restricted to its star schema and thus provide little flexibility. This is especially disadvantageous for external analysis with statistic software packages like SPSS or R. Further, data exports are limited to items previously selected within the query tool of i2b2. We present a tool for the case-oriented export of all clinical facts of a selected patient cohort into a CSV file for further analysis.","PeriodicalId":125683,"journal":{"name":"Medical Informatics Europe","volume":"72 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"1900-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Generic Case Extractor: Extended Export of Clinical Facts from i2b2\",\"authors\":\"Daniel Firnkorn, M. Gietzelt, C. Karmen, Matthias Ganzinger, P. Knaup-Gregori\",\"doi\":\"10.3233/978-1-61499-512-8-937\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Data import and export tools of the biomedical data warehouse system i2b2 (https://www.i2b2.org/) are restricted to its star schema and thus provide little flexibility. This is especially disadvantageous for external analysis with statistic software packages like SPSS or R. Further, data exports are limited to items previously selected within the query tool of i2b2. We present a tool for the case-oriented export of all clinical facts of a selected patient cohort into a CSV file for further analysis.\",\"PeriodicalId\":125683,\"journal\":{\"name\":\"Medical Informatics Europe\",\"volume\":\"72 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1900-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Medical Informatics Europe\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3233/978-1-61499-512-8-937\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Medical Informatics Europe","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3233/978-1-61499-512-8-937","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Generic Case Extractor: Extended Export of Clinical Facts from i2b2
Data import and export tools of the biomedical data warehouse system i2b2 (https://www.i2b2.org/) are restricted to its star schema and thus provide little flexibility. This is especially disadvantageous for external analysis with statistic software packages like SPSS or R. Further, data exports are limited to items previously selected within the query tool of i2b2. We present a tool for the case-oriented export of all clinical facts of a selected patient cohort into a CSV file for further analysis.
京公网安备 11010802042870号
京ICP备2023020795号-1
分享
求助内容：
应助结果提醒方式：
扫码关注我们
