基于抽象意义表示的生物医学事件提取

Sudha Rao, D. Marcu, Kevin Knight, Hal Daumé
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引用次数: 76

摘要

我们提出了一种新颖的,基于抽象意义表示(AMR)的方法来识别生物医学文本中的分子事件/相互作用。我们的主要贡献是:(1)对我们假设的经验验证,即事件是AMR图的子图,(2)基于神经网络的模型,该模型可以识别给定AMR的事件子图,以及(3)基于远程监督的方法来收集额外的训练数据。我们在2013年Genia事件提取数据集上评估了我们的方法,并显示出有希望的结果。
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Biomedical Event Extraction using Abstract Meaning Representation
We propose a novel, Abstract Meaning Representation (AMR) based approach to identifying molecular events/interactions in biomedical text. Our key contributions are: (1) an empirical validation of our hypothesis that an event is a subgraph of the AMR graph, (2) a neural network-based model that identifies such an event subgraph given an AMR, and (3) a distant supervision based approach to gather additional training data. We evaluate our approach on the 2013 Genia Event Extraction dataset and show promising results.
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