{"title":"好数据,大数据,还是没有数据?生物医学论文研究方向分类器开发的三种方法比较","authors":"S. Chandrasekhar, Chieh-Yang Huang, Ting Huang","doi":"10.48550/arXiv.2306.04820","DOIUrl":null,"url":null,"abstract":"The rapid growth of scientific publications, particularly during the COVID-19 pandemic, emphasizes the need for tools to help researchers efficiently comprehend the latest advancements. One essential part of understanding scientific literature is research aspect classification, which categorizes sentences in abstracts to Background, Purpose, Method, and Finding. In this study, we investigate the impact of different datasets on model performance for the crowd-annotated CODA-19 research aspect classification task. Specifically, we explore the potential benefits of using the large, automatically curated PubMed 200K RCT dataset and evaluate the effectiveness of large language models (LLMs), such as LLaMA, GPT-3, ChatGPT, and GPT-4. Our results indicate that using the PubMed 200K RCT dataset does not improve performance for the CODA-19 task. We also observe that while GPT-4 performs well, it does not outperform the SciBERT model fine-tuned on the CODA-19 dataset, emphasizing the importance of a dedicated and task-aligned datasets dataset for the target task.","PeriodicalId":200974,"journal":{"name":"Workshop on Biomedical Natural Language Processing","volume":"43 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-06-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Good Data, Large Data, or No Data? Comparing Three Approaches in Developing Research Aspect Classifiers for Biomedical Papers\",\"authors\":\"S. Chandrasekhar, Chieh-Yang Huang, Ting Huang\",\"doi\":\"10.48550/arXiv.2306.04820\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The rapid growth of scientific publications, particularly during the COVID-19 pandemic, emphasizes the need for tools to help researchers efficiently comprehend the latest advancements. One essential part of understanding scientific literature is research aspect classification, which categorizes sentences in abstracts to Background, Purpose, Method, and Finding. In this study, we investigate the impact of different datasets on model performance for the crowd-annotated CODA-19 research aspect classification task. Specifically, we explore the potential benefits of using the large, automatically curated PubMed 200K RCT dataset and evaluate the effectiveness of large language models (LLMs), such as LLaMA, GPT-3, ChatGPT, and GPT-4. Our results indicate that using the PubMed 200K RCT dataset does not improve performance for the CODA-19 task. We also observe that while GPT-4 performs well, it does not outperform the SciBERT model fine-tuned on the CODA-19 dataset, emphasizing the importance of a dedicated and task-aligned datasets dataset for the target task.\",\"PeriodicalId\":200974,\"journal\":{\"name\":\"Workshop on Biomedical Natural Language Processing\",\"volume\":\"43 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-06-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Workshop on Biomedical Natural Language Processing\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.48550/arXiv.2306.04820\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Workshop on Biomedical Natural Language Processing","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.48550/arXiv.2306.04820","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Good Data, Large Data, or No Data? Comparing Three Approaches in Developing Research Aspect Classifiers for Biomedical Papers
The rapid growth of scientific publications, particularly during the COVID-19 pandemic, emphasizes the need for tools to help researchers efficiently comprehend the latest advancements. One essential part of understanding scientific literature is research aspect classification, which categorizes sentences in abstracts to Background, Purpose, Method, and Finding. In this study, we investigate the impact of different datasets on model performance for the crowd-annotated CODA-19 research aspect classification task. Specifically, we explore the potential benefits of using the large, automatically curated PubMed 200K RCT dataset and evaluate the effectiveness of large language models (LLMs), such as LLaMA, GPT-3, ChatGPT, and GPT-4. Our results indicate that using the PubMed 200K RCT dataset does not improve performance for the CODA-19 task. We also observe that while GPT-4 performs well, it does not outperform the SciBERT model fine-tuned on the CODA-19 dataset, emphasizing the importance of a dedicated and task-aligned datasets dataset for the target task.