在整个故事环境中实现计算再现性

K. Chard, N. Gaffney, Matthew B. Jones, K. Kowalik, Bertram Ludäscher, J. Nabrzyski, V. Stodden, I. Taylor, M. Turk, C. Willis
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引用次数: 12

摘要

我们提出并定义了一个结构化的数字对象,称为“故事”,用于传播和出版学术记录中的计算科学发现。这个故事来自美国国家科学基金会资助的“整个故事”项目(wholtale.org),该项目正在开发一个计算环境,旨在捕捉与科学实验相关的整个计算管道,从而实现计算的可重复性。Tale允许研究人员创建和打包代码、数据和有关工作流和计算环境的信息,以支持、审查和重新创建已发表的研究报告中的计算结果。然后,Tale捕获了促进理解、透明和执行Tale所需的工件和信息,以便在发布时进行审查和再现。
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Implementing Computational Reproducibility in the Whole Tale Environment
We present and define a structured digital object, called a "Tale," for the dissemination and publication of computational scientific findings in the scholarly record. The Tale emerges from the NSF funded Whole Tale project (wholetale.org) which is developing a computational environment designed to capture the entire computational pipeline associated with a scientific experiment and thereby enable computational reproducibility. A Tale allows researchers to create and package code, data and information about the workflow and computational environment necessary to support, review, and recreate the computational results reported in published research. The Tale then captures the artifacts and information needed to facilitate understanding, transparency, and execution of the Tale for review and reproducibility at the time of publication.
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