组织图像中有丝分裂检测的多尺度深度神经网络

Tasleem Kausar, Mingjiang Wang, Boqian Wu, Muhammad Idrees, B. Kanwal
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引用次数: 11

摘要

乳腺癌影像中有丝分裂图像的检测对检测肿瘤的侵袭性具有重要意义。目前,在临床环境中,病理学家在超级显微镜下在玻片上可视化多个高倍场是一个极其繁琐和耗时的过程。有丝分裂自动检测方法的发展需要时间,但也面临着尺度不变性、数据不足、图像染色不当和样本类别不平衡等难题。然而,这些限制是;禁止组织病理图像自动分析在临床应用。本文提出了一种自动域不确定深度多尺度融合全卷积神经网络(MFF-CNN)来检测苏木精和伊红(H&E)图像中的有丝分裂。该模型融合了多层次、多尺度特征和上下文信息以实现准确的有丝分裂计数,并在训练阶段采用多步微调策略来减少过拟合。此外,通过对染色差(H&E)图像进行染色归一化并采用自动样本选择策略,有效地构建了训练图像样本。在MITOS-ATYPIA-14公共挑战数据集上进行了初步验证,验证了所提出工作的有效性。与其他先进的设计相比,该方法在检测精度和可接受的检测速度方面取得了更好的性能。
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Multi-Scale Deep Neural Network for Mitosis Detection in Histological Images
Mitotic figure detection in breast cancer images plays an important role to measure aggressiveness of the cancer tumor. Currently, in clinic environment the pathologist visualized the multiple high power fields (HPFs) on a glass slide under super microscope which is an extremely tedious and time consuming process. Development of the automatic mitotic detection methods is need of time, however it also bears, scale invariance, deficiency of data, improper image staining and sample class unbalanced dilemma. These limitations are however; prohibit the automatic histopathology image analysis to be applied in clinical practice. In this paper, an automatic domain agnostic deep multi-scale fused fully convolutional neural network (MFF-CNN) is presented to detect mitoses in Hematoxylin and eosin (H&E) images. The intended model fuses the multi-level and multi-scale features and context information for accurate mitotic count and in training phase multi-step fine-tuning strategy is used to reduce the over-fitting. Moreover, the training image samples efficiently built by stain normalized the poorly stained (H&E) images and by applying an automatic sample selection strategy. Preliminarily validation on the public MITOS-ATYPIA-14 challenge dataset, demonstrate the efficiency of proposed work. The proposed method achieves better performance in term of detection accuracy with an acceptable detection speed compared to other state-of-the-art designs.
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