LACC:一种寻找分布式内存中连接组件的线性代数算法

A. Azad, A. Buluç
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引用次数: 17

摘要

查找连接组件是图上使用最广泛的操作之一。该问题的最优串行算法已经存在了半个世纪,在过去的几十年里,在各种不同的并行计算模型下,提出了许多相互竞争的并行算法。提出了一种可在分布式存储计算机上运行的并行连接组件算法。我们的算法使用线性代数原语,并基于Awerbuch和Shiloach的PRAM算法。我们展示了结果算法,命名为线性代数连接组件LACC,在中小型图中优于竞争对手高达12倍的因素。对于具有超过50B条边的大型图,LACC可以扩展到Cray XC40超级计算机的4K节点(262K核),并且显著优于以前的算法。这种卓越的性能是通过(1)利用原始PRAM算法公式中不存在的稀疏性,(2)使用组合BLAS的高性能原语,以及(3)通过利用算法洞察力识别热点并优化它们来实现的。
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LACC: A Linear-Algebraic Algorithm for Finding Connected Components in Distributed Memory
Finding connected components is one of the most widely used operations on a graph. Optimal serial algorithms for the problem have been known for half a century, and many competing parallel algorithms have been proposed over the last several decades under various different models of parallel computation. This paper presents a parallel connected-components algorithm that can run on distributed-memory computers. Our algorithm uses linear algebraic primitives and is based on a PRAM algorithm by Awerbuch and Shiloach. We show that the resulting algorithm, named LACC for Linear Algebraic Connected Components, outperforms competitors by a factor of up to 12x for small to medium scale graphs. For large graphs with more than 50B edges, LACC scales to 4K nodes (262K cores) of a Cray XC40 supercomputer and outperforms previous algorithms by a significant margin. This remarkable performance is accomplished by (1) exploiting sparsity that was not present in the original PRAM algorithm formulation, (2) using high-performance primitives of Combinatorial BLAS, and (3) identifying hot spots and optimizing them away by exploiting algorithmic insights.
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