基于小波的基因组序列短串联重复区域识别

2014 International Conference on Mathematics and Computers in Sciences and in Industry Pub Date : 2014-09-13 DOI:10.1109/MCSI.2014.50

Mamta C. Padole

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引用次数: 3

摘要

DNA序列中的短串联重复序列(STRs)与调控机制有关。现有的str识别工具包括计算密集型字符串处理方法，期望参数如模式、模式大小或引用。本文提出了一种基于小波变换的从头开始的信号处理方法，用于检测完美、不完美和中断的STR区域。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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Recognizing Short Tandem Repeat Regions in Genomic Sequences Using Wavelet

Short Tandem Repeats (STRs) in DNA sequences are associated with regulatory mechanisms. Existing tools for recognizing STRs, involve computational intensive string processing methods expecting parameters like pattern, pattern size or reference. This paper proposes ab initio, signal processing approach involving Wavelet Transformations, for detecting perfect, imperfect and interrupted STR regions.

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2014 International Conference on Mathematics and Computers in Sciences and in Industry

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