Tigres工作流库:支持HPC系统上的科学管道

V. Hendrix, James Fox, D. Ghoshal, L. Ramakrishnan
{"title":"Tigres工作流库:支持HPC系统上的科学管道","authors":"V. Hendrix, James Fox, D. Ghoshal, L. Ramakrishnan","doi":"10.1109/CCGrid.2016.54","DOIUrl":null,"url":null,"abstract":"The growth in scientific data volumes has resulted in the need for new tools that enable users to operate on and analyze data on large-scale resources. In the last decade, a number of scientific workflow tools have emerged. These tools often target distributed environments, and often need expert help to compose and execute the workflows. Data-intensive workflows are often ad-hoc, they involve an iterative development process that includes users composing and testing their workflows on desktops, and scaling up to larger systems. In this paper, we present the design and implementation of Tigres, a workflow library that supports the iterative workflow development cycle of data-intensive workflows. Tigres provides an application programming interface to a set of programming templates i.e., sequence, parallel, split, merge, that can be used to compose and execute computational and data pipelines. We discuss the results of our evaluation of scientific and synthetic workflows showing Tigres performs with minimal template overheads (mean of 13 seconds over all experiments). We also discuss various factors (e.g., I/O performance, execution mechansims) that affect the performance of scientific workflows on HPC systems.","PeriodicalId":103641,"journal":{"name":"2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid)","volume":"3 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2016-05-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"15","resultStr":"{\"title\":\"Tigres Workflow Library: Supporting Scientific Pipelines on HPC Systems\",\"authors\":\"V. Hendrix, James Fox, D. Ghoshal, L. Ramakrishnan\",\"doi\":\"10.1109/CCGrid.2016.54\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The growth in scientific data volumes has resulted in the need for new tools that enable users to operate on and analyze data on large-scale resources. In the last decade, a number of scientific workflow tools have emerged. These tools often target distributed environments, and often need expert help to compose and execute the workflows. Data-intensive workflows are often ad-hoc, they involve an iterative development process that includes users composing and testing their workflows on desktops, and scaling up to larger systems. In this paper, we present the design and implementation of Tigres, a workflow library that supports the iterative workflow development cycle of data-intensive workflows. Tigres provides an application programming interface to a set of programming templates i.e., sequence, parallel, split, merge, that can be used to compose and execute computational and data pipelines. We discuss the results of our evaluation of scientific and synthetic workflows showing Tigres performs with minimal template overheads (mean of 13 seconds over all experiments). We also discuss various factors (e.g., I/O performance, execution mechansims) that affect the performance of scientific workflows on HPC systems.\",\"PeriodicalId\":103641,\"journal\":{\"name\":\"2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid)\",\"volume\":\"3 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2016-05-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"15\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/CCGrid.2016.54\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2016 16th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/CCGrid.2016.54","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 15

摘要

科学数据量的增长导致需要新的工具,使用户能够操作和分析大规模资源上的数据。在过去的十年中,出现了许多科学的工作流工具。这些工具通常针对分布式环境,并且通常需要专家帮助来组合和执行工作流。数据密集型工作流通常是特别的,它们涉及迭代开发过程,包括用户在桌面上组合和测试工作流,并扩展到更大的系统。在本文中,我们介绍了Tigres的设计和实现,Tigres是一个工作流库,支持数据密集型工作流的迭代工作流开发周期。Tigres为一组编程模板(序列、并行、分割、合并)提供了一个应用程序编程接口,这些模板可用于组合和执行计算和数据管道。我们讨论了我们对科学和合成工作流的评估结果,显示Tigres以最小的模板开销执行(所有实验的平均时间为13秒)。我们还讨论了影响HPC系统上科学工作流性能的各种因素(例如,I/O性能,执行机制)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Tigres Workflow Library: Supporting Scientific Pipelines on HPC Systems
The growth in scientific data volumes has resulted in the need for new tools that enable users to operate on and analyze data on large-scale resources. In the last decade, a number of scientific workflow tools have emerged. These tools often target distributed environments, and often need expert help to compose and execute the workflows. Data-intensive workflows are often ad-hoc, they involve an iterative development process that includes users composing and testing their workflows on desktops, and scaling up to larger systems. In this paper, we present the design and implementation of Tigres, a workflow library that supports the iterative workflow development cycle of data-intensive workflows. Tigres provides an application programming interface to a set of programming templates i.e., sequence, parallel, split, merge, that can be used to compose and execute computational and data pipelines. We discuss the results of our evaluation of scientific and synthetic workflows showing Tigres performs with minimal template overheads (mean of 13 seconds over all experiments). We also discuss various factors (e.g., I/O performance, execution mechansims) that affect the performance of scientific workflows on HPC systems.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Increasing the Performance of Data Centers by Combining Remote GPU Virtualization with Slurm DiBA: Distributed Power Budget Allocation for Large-Scale Computing Clusters Spatial Support Vector Regression to Detect Silent Errors in the Exascale Era DTStorage: Dynamic Tape-Based Storage for Cost-Effective and Highly-Available Streaming Service Facilitating the Execution of HPC Workloads in Colombia through the Integration of a Private IaaS and a Scientific PaaS/SaaS Marketplace
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1