植物育种的简化模型

K. Davis, P. L. Bodic, Andreas T. Ernst, R. Kapoor, R. Garc´ıa-Flores
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摘要

本文介绍了一种简化的植物育种确定性模型及其求解算法。该模型将植物育种的许多复杂性抽象为一个可以在多项式时间内解决的版本。虽然该模型只考虑单点重组,并假设所有期望的交叉都是成功的,但它提供了实现目标所需的代数的下限。该算法利用可产配子上的有利等位基因序列来指导决策,突出了考虑片段而不是单个等位基因的重要性。本文认为,片段将有助于开发更全面的植物育种模型的有效算法。然而,未来的研究应该探索扩展模型,以考虑多倍体植物和育种者在现实中面临的资源限制等因素。总的来说,本文是探索适用于植物育种问题的专用解决技术的一系列模型中的第一个。
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A simplified model for plant breeding
: This paper introduces a simplified deterministic model for plant breeding and an efficient algorithm to solve it. The model abstracts away much of the complexity of plant breeding to a version that can be solved in polynomial time. While this model only considers single-point recombinations and assumes all desired crossings are successful, it provides a lower bound on the number of generations required to achieve the target. The algorithm presented exploits runs of favourable alleles on producible gametes to guide its decision-making, which highlights the importance of considering segments rather than individual alleles. This paper suggests that seg-ments will be instrumental in the development of efficient algorithms for more comprehensive plant breeding models. However, future research should explore extending the model to account for factors such as polyploid plants and resource constraints that breeders face in reality. Overall, this paper serves as the first in a series of models exploring dedicated solving techniques applicable to plant breeding problems.
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