苏莱曼尼省旱作野生杏仁基因型的RAPD和ISSR评价

Anwar Mohammed Raouf Mahmood, J. M. Faraj, A. Sharef, H. Majeed, Fakhraddin Mustafa Hamasalih, N. Tahir
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引用次数: 1

摘要

杏仁被认为是生长在雨养地区最常见和最重要的坚果。它有许多种类,广泛分布在伊拉克库尔德斯坦地区,被当地人称为Chaqala。为了了解和提高栽培杏仁的性状,需要对野生杏仁的群体结构和遗传多样性进行全面的研究,以便将新性状转移到驯化杏仁中。因此,我们收集了12种不同的基因型,并利用随机扩增多态性DNA (RAPD)和简单序列重复间(ISSR)标记进行分析。结果表明,RAPD和ISSR标记的平均多态性频带分别为5.8和7.8。RAPD引物的多态性信息含量(PIC)在0.64 ~ 0.85之间,ISSR引物的多态性信息含量(PIC)在0.53 ~ 0.91之间,表明RAPD引物具有较强的区分能力。10个RADP标记的“Jaccard相似系数”在0.34 (G11 vs. G12) ~ 0.77 (G1 vs. G10)之间,以平均相似度(0.65)分为4组。10个ISSR标记的相似度为0.35 (G8, G10) ~ 0.79 (G6 vs. G11),聚为平均相似度(0.65)。RAPD和ISSR结构分析显示为两大类群。总的来说,这些结果显示了所研究的基因型之间和群体之间的多样性,这对未来的杏仁育种和保护计划非常重要。
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Evaluation of Wild Almond Genotypes Grown as a Rain-fed Crop in Sulaimani Governorate using RAPD and ISSR Markers
Almond is considered the most common and essential nut grown in the rainfed area. It has many species wildly distributed in the Iraqi Kurdistan region, which are called Chaqala by local people. To understand and improve the characteristics of the cultivated almonds, a comprehensive study of wild almonds in terms of population structure and genetic diversity is needed to transfer new traits into the domesticated almonds. So, twelve different genotypes were collected and analyzed using random amplified polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR) markers. The results revealed polymorphic bands for both markers, the mean value of 5.8 for the RAPD marker and 7.8 for the ISSR marker was also documented. The polymorphic information content (PIC) values were obtained for RAPD primes that range between (0.64-0.85) and ISSR primers were also verified between (0.53-0.91), which shows the discriminatory power of these markers. “Jaccard similarity coefficients” were obtained between 0.34 (G11 vs. G12) to 0.77 (G1 vs. G10), and clustered into four groups with a mean similarity (0.65) for ten RADP markers. For ten ISSR markers, 0.35 (G8, G10) to 0.79 (G6 vs. G11) were also observed, which is clustered into a mean similarity (0.65). Structure analysis of RAPD and ISSR showed two major groups. Overall, these outcomes showed the diversity between the studied genotypes and among groups which are highly important for future almond breeding and conservation programs.
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