在红细胞循环过程中,疟疾寄生虫恶性疟原虫细胞网络中影响基因的及时表达

Xinran Yu, H. Zhang, T. Lilburn, Hong Cai, Jianying Gu, T. Korkmaz, Yufeng Wang
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引用次数: 0

摘要

疟疾仍然是全世界最重要的公共卫生问题之一。疟疾每年造成近50万人死亡,世界上约40%的人口生活在疟疾流行地区。抗疟疾发展的一个主要障碍是我们对疟疾寄生虫的动态细胞网络的了解有限。本研究通过结合RNA-Seq分析和基于pagerank算法的网络挖掘,研究了48小时红细胞周期中寄生虫基因的时间特异性表达,并鉴定了可能在寄生虫发育和入侵中发挥影响作用的基因。基因表达的即时机制可能有助于疟疾寄生虫动态而有效的适应策略。
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Just-in-time expression of influential genes in the cellular networks of the malaria parasite Plasmodium falciparum during the red blood cycle
Malaria remains one of the most important public health concerns worldwide. It causes nearly half a million deaths every year, and about 40% of the world's population lives in the endemic regions of malaria. A major hurdle in antimalarial development is our limited understanding of the dynamic cellular networks in the malaria parasite. In this study, by coupling RNA-Seq analysis and network mining using a PageRank-based algorithm, we investigated the temporal-specific expression of parasite genes during the 48-hour red blood cycle, and identified genes that may play influential roles in parasite development and invasion. The just-in-time mechanism for gene expression may contribute to a dynamic yet effective adaptive strategy of the malaria parasite.
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