使用无监督机器学习识别乳腺癌遗传特征模式

R. Hamoudi, M. Bettayeb, Areej Alsaafin, M. Hachim, Q. Nasir, A. B. Nassif
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引用次数: 4

摘要

利用机器学习来改善医疗诊断是一个很有前途的领域。本研究的目的是利用公开的基因表达微阵列数据识别和分析乳腺癌等级的独特遗传特征。癌症类型的分类是基于无监督特征学习。无监督聚类使用基于相似性度量的矩阵代数,使其适合于分析基因表达。该方法的主要优点是能够使用来自不同级别乳腺癌的基因表达数据来生成自动识别和增强癌症诊断的特征。在本文中,我们测试了不同的相似性度量,以便找到使用表达微阵列数据识别具有共同功能的基因集的最佳方法。
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Identifying Patterns of Breast Cancer Genetic Signatures using Unsupervised Machine Learning
Deploying machine learning to improve medical diagnosis is a promising area. The purpose of this study is to identify and analyze unique genetic signatures for breast cancer grades using publicly available gene expression microarray data. The classification of cancer types is based on unsupervised feature learning. Unsupervised clustering use matrix algebra based on similarity measures which made it suitable for analyzing gene expression. The main advantage of the proposed approach is the ability to use gene expression data from different grades of breast cancer to generate features that automatically identify and enhance the cancer diagnosis. In this paper, we tested different similarity measures in order to find the best way that identifies the sets of genes with a common function using expression microarray data.
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