一种整合组织病理斑块特征的上下文引导注意方法

Yuqi Chen, Juan Liu, Peng Jiang, Jing Feng, Dehua Cao, Baochuan Pang
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引用次数: 0

摘要

许多研究者对组织病理学全切片图像(wsi)的分类进行了研究。由于WSI太大而无法直接处理,研究人员通常将其切割成许多小块,然后将从这些小块中提取的判别特征进行整合,从而获得WSI的滑动级特征。生成滑动级特征的集成策略对WSI分类模型至关重要。为此,人们提出了许多基于注意力的方法。然而,大多数基于注意力的方法没有考虑补丁关系,从而影响了模型的分类性能。在这项工作中,我们提出了一种新的上下文引导注意力(CGattention)方法来整合补丁级特征,该方法构建了一个上下文向量来模拟整个WSI的全局上下文信息,并隐式地表征了WSI中补丁之间的关系。当在两个公开的数据集上进行评估时,基于CGattention的模型比其他基于attention的模型获得了更好的性能。
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A Context-Guided Attention Method for Integrating Features of Histopathological Patches
Lots of researchers have studied for classifying histopathological whole slide images (WSIs). Since a WSI is too large to be processed directly, researchers usually cut it into many small-sized patches and then integrate the discriminative features extracted from the patches to obtain a slide-level feature of the WSI. The integration strategy generating the slide-level features is crucial for the WSI classification model. Lots of attention-based methods have been proposed for such purpose. However, most attention-based methods do not take the patches relationship into consideration, which affects the classification performance of the models. In this work, we propose a novel Context-Guided attention (CGattention) method to integrate the patch-level features, which constructs a context vector to simulate the global context information of the whole WSI and implicitly characterizes the relationship between patches in the WSI. When evaluated on two publicly available datasets, the CGattention based model obtained the better performance than other attention-based models.
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