gpu特征缓存加速基于样本的GNN训练

Yuqi He, Zhiquan Lai, Zhejiang Ran, Lizhi Zhang, Dongsheng Li
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摘要

现有的图神经网络(GNN)系统采用基于样本的多gpu大规模图训练。虽然它们支持大规模的图训练,但是大的数据加载开销仍然是一个瓶颈。在这项工作中,我们提出了SCGraph,一种支持GPU高速特征缓存的方法。我们根据出度对图顶点进行分类。对于出度高的顶点,我们通过不同的gpu设置分级缓存,通过NVLink高速数据传输来增加整体缓存内容。对于出度低的顶点,我们提前扩展训练顶点的邻域来重新生成缓存。我们根据两个最先进的工业GNN框架,即DGL和paggraph在两个数据集Reddit和ogbn-products上评估SCGraph。实验结果表明,SCGraph在最先进的基线上实现了高达1.83倍的性能加速。
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Accelerating Sample-based GNN Training by Feature Caching on GPUs
The existing graph neural network (GNN) systems adopt sample-based training on large-scale graphs over multiple GPUs. Although they support large-scale graph training, large data loading overhead is still a bottleneck. In this work, we propose SCGraph, a method that supports GPU high-speed feature caching. We classify the graph vertices sorted by out-degrees. For high out-degree vertices, we set grading caches via different GPUs to increase the overall cache content through NVLink high-speed data transmission between them. For low out-degree vertices, we expand training vertices’ neighborhood in advance to regenerate cache. We evaluate SCGraph against two state-of-the-art industrial GNN frameworks, i.e., DGL and PaGraph on two datasets Reddit and ogbn-products. Experimental results show that SCGraph achieves up to 1.83× performance speedup over the state-of-the-art baselines.
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