玉米胚叶早期发育的计算模型

Charles C. N. Wang, Pei-Chun Chang, P. Sheu, J. Tsai
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引用次数: 0

摘要

玉米是一种经过充分研究的作物。由于其叶片具有克兰兹结构(KS),它已被用作C4光合作用研究的模式植物。不幸的是,只有少数研究涉及使用计算模型来描述干玉米。特别是叶片发育过程中KS的形成机制尚不清楚。本研究旨在建立一个计算模型来回答干燥迷宫中叶片发育的两个问题:(1)生长素如何抑制BDL;(2)干玉米胚叶早期种子中MP转录如何激活BDL。本文首先基于s系统模型对干玉米进行了分析,并比较了两种不同的调控网络:(1)生长素抑制BODENLOS (BDL), (2) MONOPTEROS (MP)激活BODENLOS (BDL)。我们的假设是:(1)生长素不抑制BDL, (2) MP不激活BDL。在第二阶段,我们比较了s系统参数估计方法(SPEM)和工程方法来分析两个调节网络。我们的研究结果为研究生长素的瞬时积累如何激活自我维持以及与其他遗传开关类似,它如何导致干玉米叶片的明确发育响应提供了一般机制。MP激活BDL对玉米早期胚胎发生过程中由MP和BDL蛋白介导的生长素信号转导具有重要意义。
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Computational Modeling of the Early Development of Embryonic Leaves in Maize
Maize is a well-studied crop. It has been used as a model plant for C4 studies of photosynthesis, as its leaves possess the Kranz Structure (KS). Unfortunately, only few studies addressed the use of computational models to describe dry maize. In particular, the mechanism of KS formation remains unclear during leaf development. This study aims to develop a computational model to answer the following two questions for leaf development in dry maze: (1) How Auxin inhibits BDL, and (2) How the MP transcription activates BDL in the seed of dry maize in early stages of embryonic leaves. We first analyze dry maize based on the S-systems model and compare it with two different regulatory networks: (1) Auxin inhibits BODENLOS (BDL), and (2) MONOPTEROS (MP) activates BODENLOS (BDL). Our hypotheses are: (1) Auxin does not inhibit BDL, and (2) MP does not activate BDL. In the second stage, we compare the S-systems parameter estimation method (SPEM) and the engineering method to analyze the two regulatory networks. Our result suggests a general mechanism for studying how the transient accumulation of Auxin activates self-sustaining and how, similar to other genetic switches, it results in unequivocal developmental responses of leaves in dry maize. The MP activates BDL are very important to the Auxin signaling mediated by MP and BDL proteins which are essential for cell-fate specification events in early embryogenesis of maize.
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