教生物学家使用数据可视化进行计算

K. Robbins, D. Senseman, P. E. Pate
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引用次数: 4

摘要

计算在科学各个方面的加速应用继续扩大学生技能和期望之间的差距。目前,教授计算的方法有两种:教学生一种标准的编程语言(如FORTRAN、JAVA或C),可能辅以诸如Alice之类的辅助工具;或者教他们使用诸如MATLAB之类的程序,通过表述和解决数学问题。这两种方法的失败率都很高,因为学生的数学训练和逻辑能力都很差。本文介绍了另一种方法,在使用MATLAB进行数据分析和可视化的背景下,向学生介绍计算。我们的目标是通过在他们的大学生涯早期教授高度相关的计算课程来培养具有计算能力的年轻科学家。本课程集写作、解决问题、统计、视觉分析、模拟和建模于一体,旨在培养学生具备可用的数据分析技能。这门课程是德克萨斯大学圣安东尼奥分校所有生物学专业必修的课程,目前已进入实施的第三年。
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Teaching biologists to compute using data visualization
The accelerating use of computation in all aspects of science continues to widen the gap between student skills and expectations. Currently, computation is taught using one of two approaches: teach students a standard programming language (e.g., FORTRAN, JAVA or C) perhaps augmented by support tools such as Alice or teach them to use a program such as MATLAB by formulating and solving math problems. Both approaches have high failure rates for students hindered by poor mathematics training and weak logic skills. This paper describes an alternative approach that introduces students to computing in the context of data analysis and visualization using MATLAB. Our goal is produce computationally qualified young scientists by teaching a highly relevant computational curriculum early in their college career. The course, which integrates writing, problem-solving, statistics, visual analysis, simulation, and modeling, is designed to produce students with usable data analysis skills. The course is in its third year of implementation and is required of all biology majors at the University of Texas at San Antonio.
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