在千兆级超级计算机上使用基于dag的运行时系统调查应用程序的可移植性

Qingyu Meng, A. Humphrey, John A. Schmidt, M. Berzins
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引用次数: 40

摘要

高性能计算的当前趋势对使用多核节点的应用程序代码提出了严峻的挑战,这些节点可能带有加速器和/或协处理器,并且在获得可伸缩性的同时减少了内存。使用运行时系统执行与机器无关的应用程序代码的软件框架提供了一种可能的解决方案,该系统可以使用户免受架构复杂性的影响。例如,utah框架使用流体流动求解器与基于颗粒的固体方法相结合,解决了结构化自适应网格上的一系列大规模问题。在节点上为CPU内核和/或加速器/协处理器提供可扩展的异步和动态运行时系统,从而执行计算任务的有向无环图。untah在应用程序和运行时代码之间的清晰分离使得可伸缩性提高了1000倍,而无需对应用程序代码进行重大更改。该方法在三台领先的Top500机器上进行了测试;OLCF Titan, TACC Stampede和ALCF Mira使用三个不同且具有挑战性的应用问题。对不同处理器和通信性能的可伸缩性的研究得出了一个总体结论,即基于自适应dag的方法为解决当今一些最大和最强大的计算机上具有挑战性的多尺度多物理工程问题提供了一个非常强大的抽象。
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Investigating applications portability with the uintah DAG-based runtime system on petascale supercomputers
Present trends in high performance computing present formidable challenges for applications code using multicore nodes possibly with accelerators and/or co-processors and reduced memory while still attaining scalability. Software frameworks that execute machine-independent applications code using a runtime system that shields users from architectural complexities offer a possible solution. The Uintah framework for example, solves a broad class of large-scale problems on structured adaptive grids using fluid-flow solvers coupled with particle-based solids methods. Uintah executes directed acyclic graphs of computational tasks with a scalable asynchronous and dynamic runtime system for CPU cores and/or accelerators/co-processors on a node. Uintah's clear separation between application and runtime code has led to scalability increases of 1000x without significant changes to application code. This methodology is tested on three leading Top500 machines; OLCF Titan, TACC Stampede and ALCF Mira using three diverse and challenging applications problems. This investigation of scalability with regard to the different processors and communications performance leads to the overall conclusion that the adaptive DAG-based approach provides a very powerful abstraction for solving challenging multi-scale multi-physics engineering problems on some of the largest and most powerful computers available today.
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