并行图算法中减少通信的一种算法

Harshvardhan, Adam Fidel, N. Amato, Lawrence Rauchwerger
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引用次数: 5

摘要

分布式内存系统上的图算法通常执行大量通信,这通常限制了它们的可伸缩性和性能。这项工作提出了一种透明(无需程序员干预)允许细粒度图算法利用算法通信减少优化的方法。在许多图算法中,相同的信息由一个顶点传递给它的邻居,我们称之为算法冗余。我们的方法利用算法冗余来减少位于不同处理元素上的顶点之间的通信。我们对顶点访问期间发送的消息采用算法感知的粗化,减少了消息的数量和系统中通信的绝对数量。为了实现这一点,系统结构由一个分层图表示,便于考虑到机器内存层次结构的通信优化。我们还提出了一个小世界无标度图的优化,其中枢纽顶点(即非常大的顶点)以类似的分层方式表示,这被用来增加并行性和减少通信。最后,我们提出了一个框架,透明地允许细粒度图算法利用我们的分层方法,而无需程序员干预,同时提高可扩展性和性能。我们提出的方法在131,000多个核上的实验结果表明,对于各种图挖掘和图分析算法,非分层版本的改进高达8倍。
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An Algorithmic Approach to Communication Reduction in Parallel Graph Algorithms
Graph algorithms on distributed-memory systems typically perform heavy communication, often limiting their scalability and performance. This work presents an approach to transparently (without programmer intervention) allow fine-grained graph algorithms to utilize algorithmic communication reduction optimizations. In many graph algorithms, the same information is communicated by a vertex to its neighbors, which we coin algorithmic redundancy. Our approach exploits algorithmic redundancy to reduce communication between vertices located on different processing elements. We employ algorithm-aware coarsening of messages sent during vertex visitation, reducing both the number of messages and the absolute amount of communication in the system. To achieve this, the system structure is represented by a hierarchical graph, facilitating communication optimizations that can take into consideration the machine's memory hierarchy. We also present an optimization for small-world scale-free graphs wherein hub vertices (i.e., vertices of very large degree) are represented in a similar hierarchical manner, which is exploited to increase parallelism and reduce communication. Finally, we present a framework that transparently allows fine-grained graph algorithms to utilize our hierarchical approach without programmer intervention, while improving scalability and performance. Experimental results of our proposed approach on 131,000+ cores show improvements of up to a factor of 8 times over the non-hierarchical version for various graph mining and graph analytics algorithms.
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